DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and chad

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_957357.1 Gene:chad / 394038 ZFINID:ZDB-GENE-040426-1130 Length:363 Species:Danio rerio


Alignment Length:393 Identity:94/393 - (23%)
Similarity:150/393 - (38%) Gaps:84/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 CRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLD 218
            |.|:.|.:...|.|..||.:|                           |.....:.|::..|.|.
Zfish    31 CHCHGDLQHVICDNVGLKKIP---------------------------RISEATRLLNLQRNNLG 68

  Fly   219 FLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVIN 283
            .||...|.::..|:.|.:|:.|:.::..:.|..|..|..|.||.|||..:....|.....||.:.
Zfish    69 NLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLY 133

  Fly   284 MCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGL 348
            :..|||.:.|..:....:.|..|.::.||:.||..|:                        |.|.
Zfish   134 LDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGT------------------------FKGA 174

  Fly   349 RSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIP 413
            :.||.|.:..|.:||:.....:.:.||..|.|..|.:|.....|..:|..:.||.|.:|.:|.||
Zfish   175 KDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIP 239

  Fly   414 ADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRIDS 478
            ...|.:         |...:..|.              ||:..|:.|...|||.::.|:.|.:::
Zfish   240 DHAFRS---------FGRYMEKLH--------------LNDMSLEKFSNAAFEGVTALKSLHLEN 281

  Fly   479 NKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQP--MCRGPGDLGG 541
            |||..||:..  ....:..:.|..|||.|.|....|.:|:..      ...:|  :|..|.:..|
Zfish   282 NKLRSLPNSL--EFSTIQNITLFNNPWSCTCPLTNLRKWMDT------TRNRPDAVCASPANQKG 338

  Fly   542 HEV 544
            .::
Zfish   339 KQI 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 10/58 (17%)
leucine-rich repeat 187..206 CDD:275380 1/18 (6%)
LRR_RI <201..386 CDD:238064 47/184 (26%)
leucine-rich repeat 207..230 CDD:275380 6/22 (27%)
leucine-rich repeat 231..254 CDD:275380 6/22 (27%)
LRR_8 253..313 CDD:290566 17/59 (29%)
leucine-rich repeat 255..278 CDD:275380 8/22 (36%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR_8 303..361 CDD:290566 13/57 (23%)
leucine-rich repeat 303..326 CDD:275380 7/22 (32%)
leucine-rich repeat 327..350 CDD:275380 2/22 (9%)
LRR_8 349..407 CDD:290566 17/57 (30%)
LRR_4 350..390 CDD:289563 12/39 (31%)
leucine-rich repeat 351..374 CDD:275380 6/22 (27%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
LRR_8 398..>443 CDD:290566 10/44 (23%)
leucine-rich repeat 399..422 CDD:275380 8/22 (36%)
leucine-rich repeat 423..443 CDD:275380 2/19 (11%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
LRRCT 503..554 CDD:214507 11/44 (25%)
chadNP_957357.1 LRRNT 26..52 CDD:279764 8/47 (17%)
leucine-rich repeat 57..80 CDD:275380 6/22 (27%)
LRR_8 79..139 CDD:290566 17/59 (29%)
leucine-rich repeat 81..104 CDD:275380 6/22 (27%)
LRR_RI <96..304 CDD:238064 64/256 (25%)
LRR_4 104..143 CDD:289563 13/38 (34%)
leucine-rich repeat 105..128 CDD:275380 8/22 (36%)
LRR_8 127..187 CDD:290566 19/83 (23%)
leucine-rich repeat 129..152 CDD:275380 6/22 (27%)
leucine-rich repeat 153..176 CDD:275380 9/46 (20%)
LRR_8 177..235 CDD:290566 18/57 (32%)
leucine-rich repeat 177..200 CDD:275380 6/22 (27%)
leucine-rich repeat 201..224 CDD:275380 7/22 (32%)
LRR_8 225..284 CDD:290566 20/81 (25%)
leucine-rich repeat 225..248 CDD:275380 9/31 (29%)
leucine-rich repeat 250..273 CDD:275380 8/36 (22%)
LRRCT 304..351 CDD:214507 11/44 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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