DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Lrg1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_038939951.1 Gene:Lrg1 / 367455 RGDID:1359464 Length:342 Species:Rattus norvegicus


Alignment Length:256 Identity:77/256 - (30%)
Similarity:109/256 - (42%) Gaps:11/256 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 LEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGT 367
            |:||.:|.|::.|||.|.:..:.:|:.||...|.:..:....|....:|.||.|..|::...|..
  Rat    87 LQELHLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASAR 151

  Fly   368 IFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNN 432
            ....|..|..|||..||:..:.......|..|:.|.||.|.:.|:|.........|.||.|..|.
  Rat   152 WLQGLDALGYLDLAENRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNR 216

  Fly   433 LTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLV- 496
            |..|||........|.:|.||:|.|....|.:|..|.||:.|.:.:|.|...|.|....|.... 
  Rat   217 LQRLEAGLLAPQPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSLSSTPPGLWAFLGRPTR 281

  Fly   497 ----AVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMCRGPGDLGGH------EVGLL 547
                ...:..|||.||...:.|.||:.....|::.....:|.||..:.|.      |:|.|
  Rat   282 DMQDGFDVSHNPWVCDKDLVDLCRWLAANRHKMFSQNDTLCAGPEAVRGQRLLDVAELGTL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064 27/82 (33%)
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566 5/9 (56%)
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566 19/57 (33%)
leucine-rich repeat 303..326 CDD:275380 9/22 (41%)
leucine-rich repeat 327..350 CDD:275380 5/22 (23%)
LRR_8 349..407 CDD:290566 18/57 (32%)
LRR_4 350..390 CDD:289563 13/39 (33%)
leucine-rich repeat 351..374 CDD:275380 7/22 (32%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
LRR_8 398..>443 CDD:290566 16/44 (36%)
leucine-rich repeat 399..422 CDD:275380 7/22 (32%)
leucine-rich repeat 423..443 CDD:275380 9/19 (47%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
LRRCT 503..554 CDD:214507 16/51 (31%)
Lrg1XP_038939951.1 PRK15370 <55..>293 CDD:185268 61/205 (30%)
leucine-rich repeat 65..86 CDD:275380
leucine-rich repeat 87..110 CDD:275380 9/22 (41%)
leucine-rich repeat 111..134 CDD:275380 5/22 (23%)
leucine-rich repeat 135..158 CDD:275380 7/22 (32%)
leucine-rich repeat 159..182 CDD:275380 7/22 (32%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
leucine-rich repeat 207..230 CDD:275380 9/22 (41%)
leucine-rich repeat 231..254 CDD:275380 9/22 (41%)
leucine-rich repeat 255..278 CDD:275380 7/22 (32%)
PCC 259..>339 CDD:188093 18/79 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334960
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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