DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and LINGO4

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001004432.1 Gene:LINGO4 / 339398 HGNCID:31814 Length:593 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
LRR_8 349..407 CDD:290566
LRR_4 350..390 CDD:289563
leucine-rich repeat 351..374 CDD:275380
leucine-rich repeat 375..398 CDD:275380
LRR_8 398..>443 CDD:290566
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 423..443 CDD:275380
leucine-rich repeat 471..494 CDD:275380
LRRCT 503..554 CDD:214507
LINGO4NP_001004432.1 LRRNT 31..64 CDD:214470
leucine-rich repeat 62..85 CDD:275380
LRR_8 65..120 CDD:290566
leucine-rich repeat 86..109 CDD:275380
LRR_RI 87..320 CDD:238064
LRR_8 109..168 CDD:290566
leucine-rich repeat 110..133 CDD:275380
leucine-rich repeat 134..157 CDD:275380
LRR_8 157..212 CDD:290566
leucine-rich repeat 158..181 CDD:275380
leucine-rich repeat 182..205 CDD:275380
leucine-rich repeat 206..229 CDD:275380
leucine-rich repeat 230..277 CDD:275380
LRR_8 253..309 CDD:290566
leucine-rich repeat 278..301 CDD:275380
LRR_8 301..360 CDD:290566
leucine-rich repeat 302..325 CDD:275380
leucine-rich repeat 326..344 CDD:275380
leucine-rich repeat 350..362 CDD:275378
IG_like 420..501 CDD:214653
Ig 431..501 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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