DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and fliI

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster


Alignment Length:382 Identity:100/382 - (26%)
Similarity:173/382 - (45%) Gaps:59/382 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 SQIEWNHCTSGVCRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTV 206
            |:::|                .|...|.|..:|........:.::.|:.|.|..:..: ...|:.
  Fly    29 SRVQW----------------LTLDRTQLAEIPEELGHLQKLEHLSLNHNRLEKIFGE-LTELSC 76

  Fly   207 LKELDISHNVL--DFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLP 269
            |:.||:.||.|  ..:|.:||. |:.|..|.:.:|:|:::. ....:.:||.:|:||.|:|..:|
  Fly    77 LRSLDLRHNQLKNSGIPPELFH-LEELTTLDLSHNKLKEVP-EGLERAKNLIVLNLSNNQIESIP 139

  Fly   270 ESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGW 334
            ..:|.|...|..:::..|:::..||. .|..:.|:.||:|.|.:.......:..|..|:.|....
  Fly   140 TPLFIHLTDLLFLDLSHNRLETLPPQ-TRRLINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSG 203

  Fly   335 NQ------IAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAF 393
            .|      ...||     .|.:|..|.|.:|.:..|...:: |:..||.|:|:.|.::.:  .|.
  Fly   204 TQRTLLNFPTSID-----SLANLCELDLSHNSLPKLPDCVY-NVVTLVRLNLSDNELTEL--TAG 260

  Fly   394 VEL-NNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQG-------LNNLKIL 450
            ||| ..|..|.|.:|.:.::||.| ..:..|.||.:..|.|      :|:|       |..|::.
  Fly   261 VELWQRLESLNLSRNQLVALPAAL-CKLPKLRRLLVNDNKL------NFEGIPSGIGKLGALEVF 318

  Fly   451 LLNNNILKNFDARAFEPLSQ---LEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNP 504
            ...||:|:...    |.|.:   |::|.:..|:|:.|| .|:|.|:.|..:.|..||
  Fly   319 SAANNLLEMVP----EGLCRCGALKQLNLSCNRLITLP-DAIHLLEGLDQLDLRNNP 370

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 17/60 (28%)
leucine-rich repeat 187..206 CDD:275380 4/18 (22%)
LRR_RI <201..386 CDD:238064 53/192 (28%)
leucine-rich repeat 207..230 CDD:275380 10/24 (42%)
leucine-rich repeat 231..254 CDD:275380 4/22 (18%)
LRR_8 253..313 CDD:290566 20/59 (34%)
leucine-rich repeat 255..278 CDD:275380 9/22 (41%)
leucine-rich repeat 279..302 CDD:275380 5/22 (23%)
LRR_8 303..361 CDD:290566 16/63 (25%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 6/28 (21%)
LRR_8 349..407 CDD:290566 18/58 (31%)
LRR_4 350..390 CDD:289563 11/39 (28%)
leucine-rich repeat 351..374 CDD:275380 6/22 (27%)
leucine-rich repeat 375..398 CDD:275380 9/23 (39%)
LRR_8 398..>443 CDD:290566 13/44 (30%)
leucine-rich repeat 399..422 CDD:275380 7/22 (32%)
leucine-rich repeat 423..443 CDD:275380 6/19 (32%)
leucine-rich repeat 471..494 CDD:275380 9/22 (41%)
LRRCT 503..554 CDD:214507 2/2 (100%)