DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and Cpn2

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001100555.1 Gene:Cpn2 / 303861 RGDID:1305170 Length:565 Species:Rattus norvegicus


Alignment Length:471 Identity:136/471 - (28%)
Similarity:210/471 - (44%) Gaps:42/471 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 QPVWHLATGSQIEW----------NHCTSGVCRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNID 187
            ||:..:..|:.:.|          ..|..| |.|. |.|.| |.:..|.::|:.  ||.::.:|.
  Rat    19 QPLTKMFQGAWLCWASLLLLVRVTQPCPVG-CDCF-DRKIF-CSDEQLAAIPLD--IPSHVTDIV 78

  Fly   188 LSRNILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKL 252
            ......:|:....|.|...|.::...:..:..|..|.|..|..|..|.:..:...::....|..|
  Rat    79 FVETSFTTVGTRAFSGSPNLTKVVFLNTRVHHLEPDAFGGLPRLEDLEVTGSPFSNLSANIFSNL 143

  Fly   253 RNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELS 317
            .:|..|.|..|.:..|||.:|:|...|..:.:..||:|..|..|.:....|..|::::|.:::|.
  Rat   144 SSLGKLTLDFNRLAALPEDLFHHMDTLESLQLQGNQLQTLPGRLFQSLRYLRTLNLAQNLLTQLP 208

  Fly   318 SGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTT 382
            .|..:.|:.|:.|....|..|::.:...:.|.||:.|.|.:|.|:.||..:|::|.:|..|.|..
  Rat   209 KGMFQSLSSLQILKLSDNMFARLPEGVLSNLGSLQELFLDSNAITELSPHLFSHLLSLEKLWLQH 273

  Fly   383 NRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNL 447
            |.|||:..:||..|.||..|.|..|::.::||.||.:...|..|:|..|.|.|:....|..|..|
  Rat   274 NAISHLPVSAFSSLRNLTFLNLKDNALRTLPAGLFTHNPGLLHLSLSYNQLETVPEGSFANLRKL 338

  Fly   448 KILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDK---------- 502
            ..|.|::|.:.:.....|..|.||.||.:|||.|..|.....|.|..|..:.|.:          
  Rat   339 ASLTLSHNAITHLPENVFRNLEQLVKLSLDSNNLTVLHPTLFHNLSKLQLLDLSRNQLTMLPGGI 403

  Fly   503 --------------NPWHCDCRALYLARWIREFVLKLWDGQQPMCRGPGDLGGHEVGLLRYDDL- 552
                          |||.||||..||..|:|.:..:::: ....|.||..|.|..|..|:.:.| 
  Rat   404 FDTNYDLFNLALLGNPWQCDCRLSYLTSWLRLYNDRIFN-THTFCAGPAYLKGQLVPNLKQEQLV 467

  Fly   553 CDGQWASMLSLSPRLP 568
            |.|. ...|.|..|.|
  Rat   468 CPGN-PGQLGLDDREP 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 11/58 (19%)
leucine-rich repeat 187..206 CDD:275380 3/18 (17%)
LRR_RI <201..386 CDD:238064 51/184 (28%)
leucine-rich repeat 207..230 CDD:275380 5/22 (23%)
leucine-rich repeat 231..254 CDD:275380 4/22 (18%)
LRR_8 253..313 CDD:290566 18/59 (31%)
leucine-rich repeat 255..278 CDD:275380 9/22 (41%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR_8 303..361 CDD:290566 16/57 (28%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 5/22 (23%)
LRR_8 349..407 CDD:290566 24/57 (42%)
LRR_4 350..390 CDD:289563 17/39 (44%)
leucine-rich repeat 351..374 CDD:275380 9/22 (41%)
leucine-rich repeat 375..398 CDD:275380 10/22 (45%)
LRR_8 398..>443 CDD:290566 16/44 (36%)
leucine-rich repeat 399..422 CDD:275380 8/22 (36%)
leucine-rich repeat 423..443 CDD:275380 7/19 (37%)
leucine-rich repeat 471..494 CDD:275380 10/22 (45%)
LRRCT 503..554 CDD:214507 19/51 (37%)
Cpn2NP_001100555.1 LRRNT 44..75 CDD:214470 12/35 (34%)
leucine-rich repeat 77..97 CDD:275380 4/19 (21%)
LRR_8 96..156 CDD:290566 13/59 (22%)
leucine-rich repeat 122..145 CDD:275380 4/22 (18%)
leucine-rich repeat 146..169 CDD:275380 9/22 (41%)
LRR_8 169..226 CDD:290566 14/56 (25%)
leucine-rich repeat 170..193 CDD:275380 6/22 (27%)
LRR_RI 172..418 CDD:238064 72/245 (29%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..241 CDD:275380 5/22 (23%)
LRR_8 241..300 CDD:290566 25/58 (43%)
leucine-rich repeat 242..265 CDD:275380 9/22 (41%)
leucine-rich repeat 266..289 CDD:275380 10/22 (45%)
LRR_8 288..348 CDD:290566 21/59 (36%)
leucine-rich repeat 290..313 CDD:275380 8/22 (36%)
leucine-rich repeat 314..337 CDD:275380 8/22 (36%)
LRR_8 336..396 CDD:290566 19/59 (32%)
leucine-rich repeat 338..361 CDD:275380 6/22 (27%)
leucine-rich repeat 362..383 CDD:275380 9/20 (45%)
leucine-rich repeat 386..405 CDD:275380 2/18 (11%)
LRRCT 418..459 CDD:214507 16/41 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334954
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BET7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm63545
orthoMCL 1 0.900 - - OOG6_112811
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.600

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