DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Lrrtm3

DIOPT Version :10

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001099857.1 Gene:Lrrtm3 / 294380 RGDID:1304866 Length:582 Species:Rattus norvegicus


Alignment Length:476 Identity:112/476 - (23%)
Similarity:189/476 - (39%) Gaps:94/476 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 FDLVKRVRQIESRLRSVEQPVWHLATGSQIEWNHCTSGVCRCNPDTKSFTCWNTNLKSVPVTQVI 179
            |::::.:|  .|.:..|..|...|...|..| ..|..| |||  :.|...|.:..|:.:|.:   
  Rat     3 FNVIRLLR--GSAVAVVLAPTVLLTMLSSAE-RGCPKG-CRC--EGKMVYCESQKLQEIPSS--- 58

  Fly   180 PMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDI 244
                    :|...|.               |.:.:|.|..|.::.|:.|:.|..|.:.:|.:.:|
  Rat    59 --------ISAGCLG---------------LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNI 100

  Fly   245 DHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMS 309
            |...|..:|.                                                |:||.:|
  Rat   101 DENAFNGIRR------------------------------------------------LKELILS 117

  Fly   310 RNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLAN 374
            .|:||...:.:.|.:|.|:.||..:||:..:..:.|.|||.|.:|.|.:|.:.::...||.:..|
  Rat   118 SNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRN 182

  Fly   375 LVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEAD 439
            |..|||..|||..:..|.|..:..|.||.|..|..|.:...||..:.:|..|.:..|.::.:...
  Rat   183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQT 247

  Fly   440 DFQGLNNLKILLLNNNILKNFDA-RAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKN 503
            .....::|:.|.|:.|.::.|.. ..|:.:..|::|.:|||||.|:....|....:|..:.|..|
  Rat   248 MSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGN 312

  Fly   504 PWHCDCRALYLARWIREFVLKLWDGQQPMCRGPGDLGG-HEVGLLRYDDLCDGQWAS-------- 559
            .|.|......|..|::.|  |.......:|..|.:|.| :.:..::...:|.....:        
  Rat   313 IWECSRNICSLVNWLKSF--KGLRENTILCASPKELQGVNVIDAVKNYSICGKSTTTERFDLARA 375

  Fly   560 --MLSLSPRLPVRKHQISTPM 578
              ..:..|:||..||:...|:
  Rat   376 LPKPTFKPKLPRPKHESKPPL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR 185..>437 CDD:443914 60/251 (24%)
leucine-rich repeat 187..206 CDD:275380 2/18 (11%)
leucine-rich repeat 207..230 CDD:275380 6/22 (27%)
leucine-rich repeat 231..254 CDD:275380 6/22 (27%)
leucine-rich repeat 255..278 CDD:275380 0/22 (0%)
leucine-rich repeat 279..302 CDD:275380 0/22 (0%)
leucine-rich repeat 303..326 CDD:275380 8/22 (36%)
leucine-rich repeat 327..350 CDD:275380 8/22 (36%)
leucine-rich repeat 351..374 CDD:275380 6/22 (27%)
leucine-rich repeat 375..398 CDD:275380 9/22 (41%)
leucine-rich repeat 399..422 CDD:275380 8/22 (36%)
leucine-rich repeat 423..443 CDD:275380 3/19 (16%)
leucine-rich repeat 471..494 CDD:275380 9/22 (41%)
PCC 476..>561 CDD:188093 21/95 (22%)
Lrrtm3NP_001099857.1 LRRNT 33..61 CDD:214470 9/41 (22%)
LRR 59..339 CDD:443914 84/344 (24%)
LRR 1 61..83 6/36 (17%)
leucine-rich repeat 66..86 CDD:275380 6/19 (32%)
LRR 2 84..107 7/22 (32%)
leucine-rich repeat 87..110 CDD:275380 6/22 (27%)
LRR 3 109..131 8/69 (12%)
leucine-rich repeat 111..134 CDD:275380 8/22 (36%)
LRR 4 132..155 7/22 (32%)
leucine-rich repeat 135..158 CDD:275380 8/22 (36%)
LRR 5 156..179 8/22 (36%)
leucine-rich repeat 159..182 CDD:275380 6/22 (27%)
LRR 6 181..203 10/21 (48%)
leucine-rich repeat 183..206 CDD:275380 9/22 (41%)
LRR 7 205..227 8/21 (38%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
LRR 8 229..251 3/21 (14%)
leucine-rich repeat 231..254 CDD:275380 3/22 (14%)
LRR 9 252..276 6/23 (26%)
leucine-rich repeat 255..279 CDD:275380 6/23 (26%)
LRR 10 277..300 9/22 (41%)
leucine-rich repeat 280..300 CDD:275380 9/19 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..411 6/19 (32%)

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