DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Lgr4

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_775450.2 Gene:Lgr4 / 286994 RGDID:628615 Length:951 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
LRR_8 349..407 CDD:290566
LRR_4 350..390 CDD:289563
leucine-rich repeat 351..374 CDD:275380
leucine-rich repeat 375..398 CDD:275380
LRR_8 398..>443 CDD:290566
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 423..443 CDD:275380
leucine-rich repeat 471..494 CDD:275380
LRRCT 503..554 CDD:214507
Lgr4NP_775450.2 LRRNT 29..61 CDD:214470
LRR 1 58..79
leucine-rich repeat 59..82 CDD:275380
LRR <62..301 CDD:227223
LRR 2 82..103
leucine-rich repeat 83..106 CDD:275380
LRR 3 106..127
leucine-rich repeat 107..130 CDD:275380
LRR 4 130..151
leucine-rich repeat 131..154 CDD:275380
LRR 5 154..177
leucine-rich repeat 155..178 CDD:275380
LRR 6 178..199
leucine-rich repeat 179..202 CDD:275380
LRR 7 202..223
leucine-rich repeat 203..226 CDD:275380
LRR 8 226..247
leucine-rich repeat 227..249 CDD:275380
LRR 9 249..270
leucine-rich repeat 250..273 CDD:275380
LRR 10 273..294
leucine-rich repeat 274..295 CDD:275380
LRR 275..>465 CDD:227223
LRR 11 320..341
leucine-rich repeat 321..344 CDD:275378
LRR 12 344..365
LRR_8 345..401 CDD:404697
leucine-rich repeat 345..366 CDD:275378
LRR 13 366..387
leucine-rich repeat 367..390 CDD:275378
LRR 14 390..411
leucine-rich repeat 391..414 CDD:275378
LRR 15 414..435
leucine-rich repeat 415..427 CDD:275378
leucine-rich repeat 436..461 CDD:275380
7tmA_LGR4 539..812 CDD:320483
TM helix 1 541..565 CDD:320483
TM helix 2 574..595 CDD:320483
TM helix 3 619..641 CDD:320483
TM helix 4 664..680 CDD:320483
TM helix 5 704..727 CDD:320483
TM helix 6 746..768 CDD:320483
TM helix 7 780..805 CDD:320483
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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