DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and LGI3

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_644807.1 Gene:LGI3 / 203190 HGNCID:18711 Length:548 Species:Homo sapiens


Alignment Length:166 Identity:42/166 - (25%)
Similarity:67/166 - (40%) Gaps:48/166 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 TLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLF 417
            :|:|.|...|.:....|::|..|..|.|.:|:.:.|..|||..|::|..||:..|.:.::....|
Human    68 SLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIENNDIWALSKFTF 132

  Fly   418 LNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLM 482
            ..:.:||.|:|.:|||.||..|.|:.|          :||.:.|.|.                  
Human   133 RGLKSLTHLSLANNNLQTLPRDIFRPL----------DILNDLDLRG------------------ 169

  Fly   483 FLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWI 518
                                |..:|||:..:|..|:
Human   170 --------------------NSLNCDCKVKWLVEWL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064 10/32 (31%)
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566 3/7 (43%)
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
LRR_8 349..407 CDD:290566 18/53 (34%)
LRR_4 350..390 CDD:289563 11/36 (31%)
leucine-rich repeat 351..374 CDD:275380 6/20 (30%)
leucine-rich repeat 375..398 CDD:275380 9/22 (41%)
LRR_8 398..>443 CDD:290566 16/44 (36%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..443 CDD:275380 11/19 (58%)
leucine-rich repeat 471..494 CDD:275380 0/22 (0%)
LRRCT 503..554 CDD:214507 6/16 (38%)
LGI3NP_644807.1 LRR_8 68..124 CDD:290566 19/55 (35%)
leucine-rich repeat 68..89 CDD:275378 6/20 (30%)
LRR 1 89..110 8/20 (40%)
leucine-rich repeat 90..113 CDD:275378 9/22 (41%)
LRR_8 112..172 CDD:290566 22/107 (21%)
LRR_4 113..152 CDD:289563 13/38 (34%)
LRR 2 113..134 5/20 (25%)
leucine-rich repeat 114..137 CDD:275378 5/22 (23%)
LRR 135..158 CDD:197688 11/22 (50%)
LRR 3 137..158 11/20 (55%)
leucine-rich repeat 138..161 CDD:275378 12/32 (38%)
leucine-rich repeat 162..174 CDD:275378 4/49 (8%)
LRRCT 170..218 CDD:214507 6/16 (38%)
EAR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 222..264
EPTP 222..263 CDD:281697
EAR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 268..310
EPTP 268..309 CDD:281697
EAR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 314..361
EPTP 314..359 CDD:281697
EAR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 363..406
EPTP 363..405 CDD:281697
EAR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 410..453
EPTP 410..452 CDD:281697
EAR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 455..497
EPTP 455..496 CDD:281697
EAR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 501..543
EPTP 501..541 CDD:281697
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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