DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and sym-1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_510426.1 Gene:sym-1 / 181555 WormBaseID:WBGene00006366 Length:680 Species:Caenorhabditis elegans


Alignment Length:554 Identity:127/554 - (22%)
Similarity:214/554 - (38%) Gaps:128/554 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DGDVNGGEINAMSHLANFDLVKRVRQIESRLRSVEQPVWHLATGSQIEWNHCTSGVCRCNPDTKS 162
            |..|.|..|....|              ..||.||:    |:|.:.:|.....            
 Worm    32 DSTVEGPVIKCSGH--------------DGLRMVEK----LSTTTTMEVRELA------------ 66

  Fly   163 FTCWNTNLKSVPVTQVIP-----MNMVNIDLSRNILSTLHKDTFRGL-TVLKELDISHNVLDFLP 221
                   |::..:.:|.|     :.:..:.||.|.:..:|...|.|| .|::||.:|.|.|..:|
 Worm    67 -------LENADIIEVGPKAFKTLRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVP 124

  Fly   222 FDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCD 286
            ......|..|.:|.::.|::|:|..:.|..:.:|..::|..|:|..:....|.:.          
 Worm   125 TSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANV---------- 179

  Fly   287 NQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSL 351
                         ::.|:.|.:..|.::|..|.::|.:..|..|...:|:|..|..:.|..|.||
 Worm   180 -------------KMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSL 231

  Fly   352 RTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADL 416
            ..|||:.|.||.:.|....|..||..|.|..|.:..:|.....:...|..|.|..|:.:.|..::
 Worm   232 SMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEM 296

  Fly   417 FLNVSALTRLTLFSNNLTTLEADDFQGL--------NN---------------LKILLLNNNILK 458
            |..:.::..|.|.||.::.:....|.|.        ||               |:::.|:||.::
 Worm   297 FEGLESIQHLNLDSNRISAVAPGAFAGTPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIR 361

  Fly   459 NFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYL-----ARWI 518
            .....:|:.|..|..|.:.:||:|.|.:.:|.|.:|| ||:|.:||..|.....::     |.|:
 Worm   362 EVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGPENL-AVRLQENPVVCVKNGFHVLNSGEAIWL 425

  Fly   519 REFVLKLWDGQQPMCRGPGDLGGHEVGLLRYDDLCDGQW-ASMLSLSPRL---PVRKHQISTPMN 579
            ..                           ..:.:|.|:| |....|.|:.   |:|....|..:.
 Worm   426 TN---------------------------EANTICKGEWQAQTADLCPKAQPRPIRPVCCSNEIT 463

  Fly   580 YTDYFNLYLKHIYNGTTDEELKEADITSVSIKKV 613
            .|.........:...||.||.||.  |:.:.:||
 Worm   464 TTTTTTTTTTTLAPTTTTEEEKEE--TTETTEKV 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 18/59 (31%)
leucine-rich repeat 187..206 CDD:275380 7/19 (37%)
LRR_RI <201..386 CDD:238064 50/185 (27%)
leucine-rich repeat 207..230 CDD:275380 7/22 (32%)
leucine-rich repeat 231..254 CDD:275380 6/22 (27%)
LRR_8 253..313 CDD:290566 8/59 (14%)
leucine-rich repeat 255..278 CDD:275380 5/22 (23%)
leucine-rich repeat 279..302 CDD:275380 0/22 (0%)
LRR_8 303..361 CDD:290566 19/57 (33%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
LRR_8 349..407 CDD:290566 19/57 (33%)
LRR_4 350..390 CDD:289563 15/39 (38%)
leucine-rich repeat 351..374 CDD:275380 9/22 (41%)
leucine-rich repeat 375..398 CDD:275380 5/22 (23%)
LRR_8 398..>443 CDD:290566 11/44 (25%)
leucine-rich repeat 399..422 CDD:275380 6/22 (27%)
leucine-rich repeat 423..443 CDD:275380 5/19 (26%)
leucine-rich repeat 471..494 CDD:275380 8/22 (36%)
LRRCT 503..554 CDD:214507 5/55 (9%)
sym-1NP_510426.1 leucine-rich repeat 62..81 CDD:275380 3/37 (8%)
LRR_5 74..208 CDD:290045 34/156 (22%)
LRR_RI 81..384 CDD:238064 78/325 (24%)
leucine-rich repeat 86..108 CDD:275380 7/21 (33%)
leucine-rich repeat 110..133 CDD:275380 7/22 (32%)
leucine-rich repeat 134..157 CDD:275380 6/22 (27%)
leucine-rich repeat 158..182 CDD:275380 5/46 (11%)
LRR_8 182..241 CDD:290566 19/58 (33%)
leucine-rich repeat 183..206 CDD:275380 6/22 (27%)
leucine-rich repeat 207..230 CDD:275380 7/22 (32%)
leucine-rich repeat 231..254 CDD:275380 9/22 (41%)
LRR_8 253..313 CDD:290566 16/59 (27%)
leucine-rich repeat 255..278 CDD:275380 5/22 (23%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR_8 302..384 CDD:290566 17/81 (21%)
leucine-rich repeat 303..323 CDD:275380 5/19 (26%)
leucine-rich repeat 350..373 CDD:275380 6/22 (27%)
leucine-rich repeat 374..394 CDD:275380 7/19 (37%)
leucine-rich repeat 399..410 CDD:275378 5/10 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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