DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and fli-1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_498913.2 Gene:fli-1 / 176215 WormBaseID:WBGene00001443 Length:1257 Species:Caenorhabditis elegans


Alignment Length:361 Identity:92/361 - (25%)
Similarity:173/361 - (47%) Gaps:53/361 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 NTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLDF--LPFDLFQDLD 229
            ::.|:.||.......|:.::.::.|.|.::|.: ...|..|:.:.:..|.|..  :|.|:|: :.
 Worm    41 DSKLEQVPDELSRCANLEHLQMAHNQLISVHGE-LSDLPRLRSVIVRDNNLKTAGIPTDIFR-MK 103

  Fly   230 SLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPP 294
            .|.::.:..|||.::.....:...:: :|:||.|.|..:|.|:..:...|..:::.:|::...||
 Worm   104 DLTIIDLSRNQLREVPTNLEYAKGSI-VLNLSYNNIETIPNSVCANLIDLLFLDLSNNKLDMLPP 167

  Fly   295 NLLRDQLMLEELDMSRNKISELSSGSIRYLTKL---------KTLDFGWNQIAKIDDDFFAGLRS 350
            . :|...||:.|.:|.|.::......:..:|.|         :|||   |....:||     :.:
 Worm   168 Q-IRRLSMLQSLKLSNNPLNHFQLKQLPSMTSLSVLHMSNTNRTLD---NIPPTLDD-----MHN 223

  Fly   351 LRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHI---DGNAFVELNNLNELFLGQNSMSSI 412
            ||.:....|.:..:...:| .|.||..|:|:.|:|..:   :|    |..||..|.:..|.::.:
 Worm   224 LRDVDFSENNLPIVPEALF-KLRNLRKLNLSGNKIEKLNMTEG----EWENLETLNMSHNQLTVL 283

  Fly   413 PADLFLNVSALTRLTLFSNNLTTLEADDFQG-------LNNLKILLLNNNILKNFDARAFEPLS- 469
            | |..:.::.||:|...:|.||      |:|       |..|.:|.|:.|.|:...    |.:| 
 Worm   284 P-DCVVKLTRLTKLYAANNQLT------FEGIPSGIGKLIQLTVLHLSYNKLELVP----EGISR 337

  Fly   470 --QLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKN 503
              :|:||::|.|:|:.||.| :|.|.:|..:.|.:|
 Worm   338 CVKLQKLKLDHNRLITLPEG-IHLLPDLKVLDLHEN 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 13/60 (22%)
leucine-rich repeat 187..206 CDD:275380 4/18 (22%)
LRR_RI <201..386 CDD:238064 46/195 (24%)
leucine-rich repeat 207..230 CDD:275380 6/24 (25%)
leucine-rich repeat 231..254 CDD:275380 4/22 (18%)
LRR_8 253..313 CDD:290566 17/59 (29%)
leucine-rich repeat 255..278 CDD:275380 7/22 (32%)
leucine-rich repeat 279..302 CDD:275380 5/22 (23%)
LRR_8 303..361 CDD:290566 15/66 (23%)
leucine-rich repeat 303..326 CDD:275380 4/22 (18%)
leucine-rich repeat 327..350 CDD:275380 7/31 (23%)
LRR_8 349..407 CDD:290566 16/60 (27%)
LRR_4 350..390 CDD:289563 11/42 (26%)
leucine-rich repeat 351..374 CDD:275380 5/22 (23%)
leucine-rich repeat 375..398 CDD:275380 7/25 (28%)
LRR_8 398..>443 CDD:290566 13/44 (30%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..443 CDD:275380 7/19 (37%)
leucine-rich repeat 471..494 CDD:275380 11/22 (50%)
LRRCT 503..554 CDD:214507 1/1 (100%)
fli-1NP_498913.2 leucine-rich repeat 9..33 CDD:275380
LRR_RI <13..162 CDD:238064 27/123 (22%)
LRR_8 32..90 CDD:290566 10/49 (20%)
leucine-rich repeat 35..56 CDD:275380 3/14 (21%)
leucine-rich repeat 57..79 CDD:275380 4/22 (18%)
LRR_8 78..138 CDD:290566 14/61 (23%)
leucine-rich repeat 80..104 CDD:275380 6/24 (25%)
leucine-rich repeat 105..128 CDD:275380 4/22 (18%)
LRR_RI 129..373 CDD:238064 74/271 (27%)
leucine-rich repeat 129..151 CDD:275380 7/22 (32%)
LRR_8 130..185 CDD:290566 17/55 (31%)
leucine-rich repeat 152..174 CDD:275380 5/22 (23%)
leucine-rich repeat 175..198 CDD:275380 4/22 (18%)
LRR_8 197..257 CDD:290566 18/68 (26%)
leucine-rich repeat 199..223 CDD:275380 7/31 (23%)
leucine-rich repeat 224..246 CDD:275380 5/22 (23%)
LRR_8 245..303 CDD:290566 18/62 (29%)
leucine-rich repeat 247..269 CDD:275380 7/25 (28%)
leucine-rich repeat 270..292 CDD:275380 5/22 (23%)
leucine-rich repeat 293..317 CDD:275380 9/29 (31%)
LRR_8 317..372 CDD:290566 20/59 (34%)
leucine-rich repeat 318..338 CDD:275380 7/23 (30%)
leucine-rich repeat 341..363 CDD:275378 11/22 (50%)
gelsolin_S1_like 502..613 CDD:200446
gelsolin_like 629..717 CDD:200436
gelsolin_S3_like 738..837 CDD:200448
gelsolin_like 928..1014 CDD:200436
gelsolin_S5_like 1034..1141 CDD:200444
ADF_gelsolin 1151..1250 CDD:301701
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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