DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and tol-1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001020983.1 Gene:tol-1 / 171635 WormBaseID:WBGene00006593 Length:1221 Species:Caenorhabditis elegans


Alignment Length:608 Identity:146/608 - (24%)
Similarity:249/608 - (40%) Gaps:138/608 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PIQSLDEFR----------QRYLLPLISSDTRNCSLNACESL----GIVSQLLMLINSMPNGTQS 81
            |:..|::|.          ||.|..|......|.|.|...||    ..|:|.|::::...|    
 Worm   144 PLARLEKFSLTRSRNIELPQRLLCSLPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRN---- 204

  Fly    82 AANDKKPPKSKANGHNDGDVNGGEINAMSHLANFDLVKR----VRQIESRLRSVEQPVWHLATG- 141
                                         .|.|.:...|    :|||.....|:.:....|||. 
 Worm   205 -----------------------------RLTNIEQFLRGIPAIRQISVAYNSIAELDLSLATPF 240

  Fly   142 -SQI--EWNHCTSGVCRCNPDTKSF--TCWNTN-----LKSVPVTQVIPMNMVNIDLSRNILSTL 196
             .|:  |.|...        |..|.  |..:.|     ||.||.......::|.:::|||.:...
 Worm   241 LQQLDAEANRIV--------DLTSLPGTVVHVNLAGNALKRVPDAVAELASLVALNVSRNEIEAG 297

  Fly   197 HKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLV-LRIQNNQLEDIDHRTFWKLRNLNILDL 260
            :...|.. ..|:.||.|:|.||.||.:..|..:..:. |.:::|.:|.:.........||..|||
 Worm   298 NSSVFSS-PELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLTGGVLANATNLQTLDL 361

  Fly   261 SKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLT 325
            |.|::.:..:.:.....::..:.:.:|.::...|:.| ..|.||.||:|.||::|:.: :|..:.
 Worm   362 SSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSL-SGLKLESLDLSHNKLTEVPA-AIGKVE 424

  Fly   326 KLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDG 390
            :||.:|...|:|||:.......::.|.|:.|.||::.|:...||::.:.|.:||::.|.||.:..
 Worm   425 QLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFK 489

  Fly   391 NAFVELNNLNELFLGQNSM----------------------------SSIPADL-FLN-----VS 421
            :||.....|.::.:..|.:                            |::|.:| .||     ::
 Worm   490 DAFARCPKLRKISMKMNKIKSLDEGLTEASGLRRLDVSHNEILVLKWSALPENLEILNADNNDIN 554

  Fly   422 ALT------------RLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKL 474
            .||            .::|.:|.:|.:.||...  |:|:.|.::||.|......|....|||.:|
 Worm   555 LLTAASMSPSTANLKSVSLSNNGITIMNADQIP--NSLESLDVSNNRLAKLGKTALAAKSQLRRL 617

  Fly   475 RIDSNKLMFLPH------GALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMC 533
            .:..|.|..:..      .|:|.||    |::.:||..|||:..::....:..|| :.|.:...|
 Worm   618 NLKGNLLTVVATESMKVVEAVHPLK----VEISENPLICDCQMGWMIGGAKPKVL-IQDSETASC 677

  Fly   534 RGPGDLGGHEV---GLLRYDDLC 553
            ....|  ||::   .|.:.|.||
 Worm   678 SHAVD--GHQIQIQSLSKKDLLC 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 17/59 (29%)
leucine-rich repeat 187..206 CDD:275380 4/18 (22%)
LRR_RI <201..386 CDD:238064 53/185 (29%)
leucine-rich repeat 207..230 CDD:275380 10/22 (45%)
leucine-rich repeat 231..254 CDD:275380 3/23 (13%)
LRR_8 253..313 CDD:290566 17/59 (29%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..302 CDD:275380 3/22 (14%)
LRR_8 303..361 CDD:290566 21/57 (37%)
leucine-rich repeat 303..326 CDD:275380 9/22 (41%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
LRR_8 349..407 CDD:290566 17/57 (30%)
LRR_4 350..390 CDD:289563 14/39 (36%)
leucine-rich repeat 351..374 CDD:275380 8/22 (36%)
leucine-rich repeat 375..398 CDD:275380 8/22 (36%)
LRR_8 398..>443 CDD:290566 14/90 (16%)
leucine-rich repeat 399..422 CDD:275380 7/56 (13%)
leucine-rich repeat 423..443 CDD:275380 7/31 (23%)
leucine-rich repeat 471..494 CDD:275380 7/28 (25%)
LRRCT 503..554 CDD:214507 16/54 (30%)
tol-1NP_001020983.1 leucine-rich repeat 71..95 CDD:275380
leucine-rich repeat 96..119 CDD:275380
leucine-rich repeat 120..171 CDD:275380 7/26 (27%)
leucine-rich repeat 172..195 CDD:275380 6/22 (27%)
leucine-rich repeat 196..283 CDD:275380 23/127 (18%)
leucine-rich repeat 219..240 CDD:275378 7/20 (35%)
leucine-rich repeat 241..258 CDD:275378 5/24 (21%)
LRR 265..600 CDD:227223 85/339 (25%)
leucine-rich repeat 287..306 CDD:275380 4/19 (21%)
leucine-rich repeat 307..331 CDD:275380 10/23 (43%)
leucine-rich repeat 332..355 CDD:275380 3/22 (14%)
leucine-rich repeat 356..379 CDD:275380 6/22 (27%)
leucine-rich repeat 380..395 CDD:275380 1/14 (7%)
leucine-rich repeat 403..425 CDD:275380 9/22 (41%)
leucine-rich repeat 426..449 CDD:275380 7/22 (32%)
leucine-rich repeat 450..473 CDD:275380 8/22 (36%)
leucine-rich repeat 474..497 CDD:275380 8/22 (36%)
leucine-rich repeat 498..520 CDD:275380 2/21 (10%)
leucine-rich repeat 543..567 CDD:275380 5/23 (22%)
leucine-rich repeat 568..589 CDD:275380 5/22 (23%)
leucine-rich repeat 590..613 CDD:275380 6/22 (27%)
leucine-rich repeat 614..633 CDD:275380 4/18 (22%)
leucine-rich repeat 763..785 CDD:275378
LRR_8 785..844 CDD:338972
leucine-rich repeat 786..809 CDD:275378
LRR_9 <806..>890 CDD:373143
leucine-rich repeat 810..833 CDD:275378
leucine-rich repeat 834..857 CDD:275378
leucine-rich repeat 858..879 CDD:275378
leucine-rich repeat 880..892 CDD:275378
TIR_2 1056..1194 CDD:390066
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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