DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and Gp1ba

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_034456.2 Gene:Gp1ba / 14723 MGIID:1333744 Length:734 Species:Mus musculus


Alignment Length:467 Identity:105/467 - (22%)
Similarity:155/467 - (33%) Gaps:154/467 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 LSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNI 257
            |.:.|..:...:|.|.|::..:..|..||.||..|                           ..|
Mouse    14 LHSQHTCSISKVTSLLEVNCENKKLTALPADLPAD---------------------------TGI 51

  Fly   258 LDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPN--LLRDQLMLEELDMSRNKISELSSGS 320
            |.|.:|::|....:...|...||.:.:...::.:...|  |::    ||.||:|.|.:..|.|  
Mouse    52 LHLGENQLGTFSTASLVHFTHLTYLYLDRCELTSLQTNGKLIK----LENLDLSHNNLKSLPS-- 110

  Fly   321 IRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRI 385
                       .||            .|.:|.||.:..|::.|||..:                 
Mouse   111 -----------LGW------------ALPALTTLDVSFNKLGSLSPGV----------------- 135

  Fly   386 SHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKIL 450
              :||     |:.|.||:|..|.:.|:|..|.|..:.|.:|.|.:|.|..|.:....||.:|..|
Mouse   136 --LDG-----LSQLQELYLQNNDLKSLPPGLLLPTTKLKKLNLANNKLRELPSGLLDGLEDLDTL 193

  Fly   451 LLNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLA 515
            .|..|.|:......|..|              .||...||.           |.|:|||..||..
Mouse   194 YLQRNWLRTIPKGFFGTL--------------LLPFVFLHA-----------NSWYCDCEILYFR 233

  Fly   516 RWIREFV--LKLWD--------------------GQQPMCRGPGDLGGHEVGLLRYDDLCD---- 554
            .|::|..  :.||.                    ...|:...||.......|...|||..|    
Mouse   234 HWLQENANNVYLWKQGVDVKDTTPNVASVRCANLDNAPVYSYPGKGCPTSSGDTDYDDYDDIPDV 298

  Fly   555 -----------------GQWASMLSLSPRLPVRKHQISTPMNY--TDYFNLYLKHIYNG-TTDEE 599
                             ..| |:|:.:|........||.|..:  |...:.::.....| ||..|
Mouse   299 PATRTEVKFSTNTKVHTTHW-SLLAAAPSTSQDSQMISLPPTHKPTKKQSTFIHTQSPGFTTLPE 362

  Fly   600 LKEADITSVSIK 611
            ..|::.|..|:|
Mouse   363 TMESNPTFYSLK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 11/47 (23%)
leucine-rich repeat 187..206 CDD:275380 2/12 (17%)
LRR_RI <201..386 CDD:238064 37/186 (20%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..254 CDD:275380 0/22 (0%)
LRR_8 253..313 CDD:290566 16/61 (26%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..302 CDD:275380 4/24 (17%)
LRR_8 303..361 CDD:290566 15/57 (26%)
leucine-rich repeat 303..326 CDD:275380 8/22 (36%)
leucine-rich repeat 327..350 CDD:275380 3/22 (14%)
LRR_8 349..407 CDD:290566 14/57 (25%)
LRR_4 350..390 CDD:289563 7/39 (18%)
leucine-rich repeat 351..374 CDD:275380 7/22 (32%)
leucine-rich repeat 375..398 CDD:275380 3/22 (14%)
LRR_8 398..>443 CDD:290566 15/44 (34%)
leucine-rich repeat 399..422 CDD:275380 9/22 (41%)
leucine-rich repeat 423..443 CDD:275380 6/19 (32%)
leucine-rich repeat 471..494 CDD:275380 4/22 (18%)
LRRCT 503..554 CDD:214507 18/72 (25%)
Gp1baNP_034456.2 LRR 28..>204 CDD:227223 61/255 (24%)
leucine-rich repeat 28..47 CDD:275380 7/18 (39%)
LRR 1 48..69 6/47 (13%)
leucine-rich repeat 51..72 CDD:275380 6/20 (30%)
LRR 2 72..93 3/20 (15%)
leucine-rich repeat 73..94 CDD:275380 4/20 (20%)
LRR 3 94..115 10/49 (20%)
leucine-rich repeat 95..117 CDD:275380 11/46 (24%)
LRR 4 117..140 9/46 (20%)
leucine-rich repeat 118..141 CDD:275380 10/46 (22%)
LRR 5 141..162 8/20 (40%)
leucine-rich repeat 142..165 CDD:275380 9/22 (41%)
LRR 6 165..188 7/22 (32%)
leucine-rich repeat 166..189 CDD:275380 8/22 (36%)
LRR 7 189..210 6/20 (30%)
leucine-rich repeat 190..211 CDD:275380 6/20 (30%)
LRRCT 221..281 CDD:214507 14/59 (24%)
DUF5585 <257..539 CDD:375359 24/119 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..429
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 460..526
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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