Sequence 1: | NP_647931.1 | Gene: | CG7509 / 38579 | FlyBaseID: | FBgn0035575 | Length: | 615 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_940980.4 | Gene: | LRRK2 / 120892 | HGNCID: | 18618 | Length: | 2527 | Species: | Homo sapiens |
Alignment Length: | 381 | Identity: | 97/381 - (25%) |
---|---|---|---|
Similarity: | 164/381 - (43%) | Gaps: | 77/381 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 190 RNILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDID--------- 245
Fly 246 -HRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMS 309
Fly 310 RNKI--SELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNL 372
Fly 373 ANLVTLDLTTNRISHIDGNAFVE-----------LN----------NLNELFLGQNSMSSIPADL 416
Fly 417 FLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPL-SQLEKLRIDSNK 480
Fly 481 LMFLPH--GALHGLKNL-VAVKLDKNPWHCDCRALYLARWIREF------VLKLWD 527 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7509 | NP_647931.1 | LRR_8 | 182..241 | CDD:290566 | 10/50 (20%) |
leucine-rich repeat | 187..206 | CDD:275380 | 6/15 (40%) | ||
LRR_RI | <201..386 | CDD:238064 | 46/196 (23%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 231..254 | CDD:275380 | 8/32 (25%) | ||
LRR_8 | 253..313 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 255..278 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 279..302 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 303..361 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 349..407 | CDD:290566 | 19/78 (24%) | ||
LRR_4 | 350..390 | CDD:289563 | 13/39 (33%) | ||
leucine-rich repeat | 351..374 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 375..398 | CDD:275380 | 10/43 (23%) | ||
LRR_8 | 398..>443 | CDD:290566 | 14/44 (32%) | ||
leucine-rich repeat | 399..422 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 423..443 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 471..494 | CDD:275380 | 10/24 (42%) | ||
LRRCT | 503..554 | CDD:214507 | 5/31 (16%) | ||
LRRK2 | NP_940980.4 | Required for RAB29-mediated activation. /evidence=ECO:0000269|PubMed:29212815 | 1..969 | 6/20 (30%) | |
LRR 1 | 983..1004 | 6/20 (30%) | |||
leucine-rich repeat | 985..1012 | CDD:275380 | 8/31 (26%) | ||
LRR | 1012..>1286 | CDD:227223 | 78/295 (26%) | ||
LRR 2 | 1012..1033 | 5/20 (25%) | |||
leucine-rich repeat | 1013..1036 | CDD:275380 | 5/22 (23%) | ||
LRR 3 | 1036..1057 | 7/21 (33%) | |||
leucine-rich repeat | 1037..1084 | CDD:275380 | 14/47 (30%) | ||
LRR 4 | 1059..1080 | 7/20 (35%) | |||
LRR 5 | 1084..1105 | 5/21 (24%) | |||
leucine-rich repeat | 1085..1108 | CDD:275380 | 4/22 (18%) | ||
LRR 6 | 1108..1129 | 6/22 (27%) | |||
leucine-rich repeat | 1109..1130 | CDD:275380 | 7/22 (32%) | ||
LRR 7 | 1130..1150 | 8/20 (40%) | |||
leucine-rich repeat | 1131..1174 | CDD:275380 | 10/43 (23%) | ||
LRR 8 | 1174..1196 | 9/22 (41%) | |||
leucine-rich repeat | 1175..1197 | CDD:275380 | 9/22 (41%) | ||
LRR 9 | 1197..1218 | 5/20 (25%) | |||
leucine-rich repeat | 1198..1221 | CDD:275380 | 5/22 (23%) | ||
LRR 10 | 1221..1241 | 6/19 (32%) | |||
leucine-rich repeat | 1222..1246 | CDD:275380 | 6/23 (26%) | ||
LRR 11 | 1246..1267 | 8/20 (40%) | |||
leucine-rich repeat | 1247..1269 | CDD:275380 | 9/21 (43%) | ||
LRR 12 | 1269..1291 | 6/37 (16%) | |||
RocCOR | 1334..1507 | CDD:206741 | |||
COR | 1527..1740 | CDD:318343 | |||
STKc_LRRK2 | 1884..2135 | CDD:270970 | |||
WD 1 | 2139..2183 | ||||
WD 2 | 2188..2228 | ||||
WD 3 | 2233..2276 | ||||
WD 4 | 2281..2327 | ||||
WD 5 | 2333..2377 | ||||
WD 6 | 2402..2438 | ||||
WD 7 | 2443..2497 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |