DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and LRRN2

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_006329.2 Gene:LRRN2 / 10446 HGNCID:16914 Length:713 Species:Homo sapiens


Alignment Length:480 Identity:119/480 - (24%)
Similarity:174/480 - (36%) Gaps:132/480 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PV--WHLATGSQIEWNHCTSGVCRCNP---------DTKSFTCWNTNLKSVPV-----TQVIPM- 181
            ||  ||:....|     |   .|:..|         :..:..|.:..|.:||.     ||.:.: 
Human    21 PVVPWHVPCPPQ-----C---ACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQ 77

  Fly   182 ----------------NMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDS 230
                            |:..:|||:|..|......|..|..|..|.:..|.|..|....|..|.|
Human    78 SNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLAS 142

  Fly   231 LLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPN 295
            |..|.:.:|||..|..|.|..|.||..|.|:.|                 ::...|::.....||
Human   143 LQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSN-----------------LLRAIDSRWFEMLPN 190

  Fly   296 LLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNR 360
                   ||.|.:..||:..:...:.|.|..|::|......:.:|.|....||:||.:||.::|:
Human   191 -------LEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQ 248

  Fly   361 ISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMS---SIPADLFLNVSA 422
            ::.:.......:..|..|||..|.:..:....|..:.:|.|  ||.|:|.   ||.....:|:..
Human   249 LARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKE--LGLNNMEELVSIDKFALVNLPE 311

  Fly   423 LTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHG 487
            ||:|.                       :.||..|.....|||..|.|:|.|.:::|.|..|...
Human   312 LTKLD-----------------------ITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQ 353

  Fly   488 ALHGLKNLVAVKLDKNPWHCDCRALYLARWIR------EFVLKLWDGQQPMCRGPGDLGGHEVGL 546
            .:..|.||..|.|..||..|||    :.||..      .|:    :.|..:|..|.||       
Human   354 TVESLPNLQEVGLHGNPIRCDC----VIRWANATGTRVRFI----EPQSTLCAEPPDL------- 403

  Fly   547 LRYDDLCDGQWASMLSLSPRLPVRK 571
                              .|||||:
Human   404 ------------------QRLPVRE 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 19/58 (33%)
leucine-rich repeat 187..206 CDD:275380 7/18 (39%)
LRR_RI <201..386 CDD:238064 50/184 (27%)
leucine-rich repeat 207..230 CDD:275380 7/22 (32%)
leucine-rich repeat 231..254 CDD:275380 9/22 (41%)
LRR_8 253..313 CDD:290566 12/59 (20%)
leucine-rich repeat 255..278 CDD:275380 4/22 (18%)
leucine-rich repeat 279..302 CDD:275380 3/22 (14%)
LRR_8 303..361 CDD:290566 18/57 (32%)
leucine-rich repeat 303..326 CDD:275380 7/22 (32%)
leucine-rich repeat 327..350 CDD:275380 6/22 (27%)
LRR_8 349..407 CDD:290566 15/57 (26%)
LRR_4 350..390 CDD:289563 10/39 (26%)
leucine-rich repeat 351..374 CDD:275380 4/22 (18%)
leucine-rich repeat 375..398 CDD:275380 6/22 (27%)
LRR_8 398..>443 CDD:290566 12/47 (26%)
leucine-rich repeat 399..422 CDD:275380 9/25 (36%)
leucine-rich repeat 423..443 CDD:275380 3/19 (16%)
leucine-rich repeat 471..494 CDD:275380 6/22 (27%)
LRRCT 503..554 CDD:214507 13/56 (23%)
LRRN2NP_006329.2 leucine-rich repeat 51..69 CDD:275380 4/17 (24%)
LRR_RI 62..288 CDD:238064 61/249 (24%)
LRR 1 70..91 2/20 (10%)
leucine-rich repeat 71..94 CDD:275380 2/22 (9%)
LRR 2 94..115 7/20 (35%)
leucine-rich repeat 95..118 CDD:275380 7/22 (32%)
LRR_8 117..177 CDD:290566 22/76 (29%)
LRR 3 118..139 6/20 (30%)
leucine-rich repeat 119..142 CDD:275380 7/22 (32%)
LRR 4 142..163 9/20 (45%)
leucine-rich repeat 143..166 CDD:275380 9/22 (41%)
LRR_8 165..222 CDD:290566 17/80 (21%)
LRR 5 166..187 6/37 (16%)
leucine-rich repeat 167..190 CDD:275380 5/39 (13%)
LRR 6 190..211 6/27 (22%)
leucine-rich repeat 191..214 CDD:275380 7/22 (32%)
LRR_RI 209..>372 CDD:238064 51/187 (27%)
LRR_8 214..273 CDD:290566 16/58 (28%)
LRR 7 214..235 4/20 (20%)
leucine-rich repeat 215..238 CDD:275380 6/22 (27%)
LRR 8 238..259 5/20 (25%)
leucine-rich repeat 239..262 CDD:275380 4/22 (18%)
LRR 9 262..283 6/20 (30%)
leucine-rich repeat 263..286 CDD:275380 6/22 (27%)
LRR 10 286..305 8/20 (40%)
leucine-rich repeat 287..311 CDD:275380 9/25 (36%)
LRR_8 310..371 CDD:290566 22/83 (27%)
LRR 11 311..333 9/44 (20%)
leucine-rich repeat 312..334 CDD:275380 9/44 (20%)
LRR 12 336..357 6/20 (30%)
leucine-rich repeat 337..360 CDD:275378 6/22 (27%)
leucine-rich repeat 361..373 CDD:275378 5/11 (45%)
TPKR_C2 369..412 CDD:301599 18/75 (24%)
I-set 430..514 CDD:254352
Ig 438..514 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.