DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and LRRC17

DIOPT Version :10

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001026862.1 Gene:LRRC17 / 10234 HGNCID:16895 Length:441 Species:Homo sapiens


Alignment Length:437 Identity:93/437 - (21%)
Similarity:157/437 - (35%) Gaps:127/437 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDI 244
            |.:::::.|:||.:.||..:.|.....||.||                        :|.|::..|
Human    80 PQDLLHMLLARNKIRTLKNNMFSKFKKLKSLD------------------------LQQNEISKI 120

  Fly   245 DHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVINMCDN------------QIQNFPPNL- 296
            :...|:.|..|..|.|..|:|.:|.|.:|.:...|:.:.:.||            .:...|.|. 
Human   121 ESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEIETLISMLQIPRNRN 185

  Fly   297 LRDQLMLEELDMSRN-KISELSSGSIRYLTKLKTLD-----FGWNQIAK--IDDDFFAGLRSLRT 353
            |.:....|.....:| |:.::.|..:....:.:.||     .|...:.|  :|..|         
Human   186 LGNYAKCESPQEQKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGRPPVIKPEVDSTF--------- 241

  Fly   354 LSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFL 418
                          ..|.:..:.|||.....:..:..|                    ||.|   
Human   242 --------------CHNYVFPIQTLDCKRKELKKVPNN--------------------IPPD--- 269

  Fly   419 NVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLMF 483
                :.:|.|..|.:..|...:|:.::.||.|.|::|.::..|..||..|:.||:|.:.:|.|..
Human   270 ----IVKLDLSYNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEELDLSNNSLQN 330

  Fly   484 LPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMCRGPGDLGGHEVG--L 546
            ..:|.|..|..|..:.|..|||.||....||..|::......::|.:  |:.|.:..|..||  :
Human   331 FDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNGLE--CKTPEEYKGWSVGKYI 393

  Fly   547 LRYDDLC-----------------DGQWASMLSLSPRLPVRKHQIST 576
            ..|.:.|                 |.:|.           :||:..|
Human   394 RSYYEECPKDKLPAYPESFDQDTEDDEWE-----------KKHRDHT 429

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR 185..>437 CDD:443914 50/272 (18%)
leucine-rich repeat 187..206 CDD:275380 6/18 (33%)
leucine-rich repeat 207..230 CDD:275380 4/22 (18%)
leucine-rich repeat 231..254 CDD:275380 5/22 (23%)
leucine-rich repeat 255..278 CDD:275380 8/22 (36%)
leucine-rich repeat 279..302 CDD:275380 6/35 (17%)
leucine-rich repeat 303..326 CDD:275380 4/23 (17%)
leucine-rich repeat 327..350 CDD:275380 6/29 (21%)
leucine-rich repeat 351..374 CDD:275380 1/22 (5%)
leucine-rich repeat 375..398 CDD:275380 4/22 (18%)
leucine-rich repeat 399..422 CDD:275380 3/22 (14%)
leucine-rich repeat 423..443 CDD:275380 5/19 (26%)
leucine-rich repeat 471..494 CDD:275380 8/22 (36%)
PCC 476..>561 CDD:188093 25/103 (24%)