DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and mxra5

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_002941051.4 Gene:mxra5 / 100495231 XenbaseID:XB-GENE-923372 Length:2851 Species:Xenopus tropicalis


Alignment Length:317 Identity:80/317 - (25%)
Similarity:131/317 - (41%) Gaps:55/317 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 LKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGN 391
            ::.::.|:|.|..|.:|.||||..|..|.:|:|.:.::....|.:|.:|....::.|::..|..:
 Frog    74 VERINLGFNSIQSIGEDSFAGLSKLELLLIHSNDVRNVPNGAFRDLVSLQVFKMSYNKLKTITSH 138

  Fly   392 AFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNI 456
            .   |:.|    ||                 ||||.:..|.:..:..:.|.||.:|::|.|..|:
 Frog   139 T---LHGL----LG-----------------LTRLHIDHNQIEFIHPNAFNGLMSLRLLHLEGNL 179

  Fly   457 LKNFDARAFEPL--------SQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALY 513
            |:...|..|...        |.|:.|.:..|.:..||...:..:..|..:.|..|||.|||...:
 Frog   180 LQQLHANTFCTFNFLGYFRQSTLKHLYLSENMIQSLPADMIKTMPLLENLYLHGNPWVCDCNIKW 244

  Fly   514 LARWIREF--VLK------LWDGQQ-PMCRGPGDLGGHEVGLLRYDDLCDGQ--WASMLSLSPRL 567
            |..|..:.  :||      ..:||. |.|..|..|...|:..|: |..|...  ::::...|...
 Frog   245 LLDWTEQTDGILKCKKDRSYENGQLCPTCSSPKHLQNREIQSLK-DAYCSRPVIYSALRDNSSYA 308

  Fly   568 PVRKHQISTPMNYTDYFNLYLKHIYNGTTDEE----------LKEADITSVSIKKVH 614
            ...:...:.|.....|.||..|.|.| .|||.          :|.||.:.::..:.|
 Frog   309 YTEEENGNDPPAAESYHNLLGKVILN-MTDEHGNKVNLDCDMIKPADFSKITWNQHH 364

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064 17/58 (29%)
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566 13/33 (39%)
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380 9/22 (41%)
LRR_8 349..407 CDD:290566 13/57 (23%)
LRR_4 350..390 CDD:289563 9/39 (23%)
leucine-rich repeat 351..374 CDD:275380 6/22 (27%)
leucine-rich repeat 375..398 CDD:275380 4/22 (18%)
LRR_8 398..>443 CDD:290566 9/44 (20%)
leucine-rich repeat 399..422 CDD:275380 3/22 (14%)
leucine-rich repeat 423..443 CDD:275380 6/19 (32%)
leucine-rich repeat 471..494 CDD:275380 5/22 (23%)
LRRCT 503..554 CDD:214507 19/59 (32%)