DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7509 and LOC100493904

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_017945746.2 Gene:LOC100493904 / 100493904 -ID:- Length:1527 Species:Xenopus tropicalis


Alignment Length:208 Identity:55/208 - (26%)
Similarity:97/208 - (46%) Gaps:9/208 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 DDDFFAGLRSLRTLSLHNNRISSLSGTIFN--NLANLVTLDLTTNRISHIDGNAFVELNNLNELF 403
            |.|:.|.:.||    |.......::.::|.  ||.::..|:|..|.|..:...||.....|:...
 Frog    38 DADYPANITSL----LFIKTAKEITASLFTNPNLKSVQRLNLPLNGIESVQPGAFRVFERLSSFA 98

  Fly   404 LGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPL 468
            |..|.:.::..|.|.....|..|.:.:|::..:..:....|::||||..:.|.::.....:|..|
 Frog    99 LSGNFLKAVSPDWFYESVPLESLNVTNNSVEEIRPEMLATLSSLKILDFSANRIRKIGRGSFSGL 163

  Fly   469 SQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREF--VLKLWDGQQP 531
            ::|..|.:.:|::.||....|..|:| .:.||..|||:|.|.....|.:::|.  ..:|.|.:..
 Frog   164 AKLTALDLSNNRISFLSGDVLSPLQN-ASFKLGNNPWNCSCPLKDFAVFLQELRNSSRLKDPENV 227

  Fly   532 MCRGPGDLGGHEV 544
            :||.|..|.|..:
 Frog   228 ICRSPPPLNGTSI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064 12/46 (26%)
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566 6/19 (32%)
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380 3/8 (38%)
LRR_8 349..407 CDD:290566 14/59 (24%)
LRR_4 350..390 CDD:289563 10/41 (24%)
leucine-rich repeat 351..374 CDD:275380 5/24 (21%)
leucine-rich repeat 375..398 CDD:275380 6/22 (27%)
LRR_8 398..>443 CDD:290566 8/44 (18%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..443 CDD:275380 3/19 (16%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
LRRCT 503..554 CDD:214507 14/44 (32%)
LOC100493904XP_017945746.2 inl_like_NEAT_1 <37..>219 CDD:411101 48/185 (26%)
leucine-rich repeat 70..93 CDD:275378 6/22 (27%)
leucine-rich repeat 94..117 CDD:275378 5/22 (23%)
LRR_8 118..176 CDD:404697 14/57 (25%)
leucine-rich repeat 118..141 CDD:275378 4/22 (18%)
leucine-rich repeat 142..165 CDD:275378 7/22 (32%)
leucine-rich repeat 166..179 CDD:275378 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.