Sequence 1: | NP_647931.1 | Gene: | CG7509 / 38579 | FlyBaseID: | FBgn0035575 | Length: | 615 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935525.1 | Gene: | lrrtm1 / 100493874 | XenbaseID: | XB-GENE-966481 | Length: | 521 | Species: | Xenopus tropicalis |
Alignment Length: | 488 | Identity: | 120/488 - (24%) |
---|---|---|---|
Similarity: | 198/488 - (40%) | Gaps: | 113/488 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 149 CTSGV---------------CRCNPDTKSFTCWNTNLKSVPVTQVIPMNM---VNIDLSRNILST 195
Fly 196 LHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDL 260
Fly 261 SKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLT 325
Fly 326 KLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDG 390
Fly 391 NAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNN 455
Fly 456 ILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIRE 520
Fly 521 FVLKLWDGQQPMCRGPGDLGGHEV-GLLRYDDLCDGQWASMLSLSPRLPVRKHQISTPMNYTDYF 584
Fly 585 NL--YLKHIYNGTTDEELKEADITSVSIKKVHN 615 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7509 | NP_647931.1 | LRR_8 | 182..241 | CDD:290566 | 17/61 (28%) |
leucine-rich repeat | 187..206 | CDD:275380 | 8/18 (44%) | ||
LRR_RI | <201..386 | CDD:238064 | 45/184 (24%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 231..254 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 253..313 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 255..278 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 279..302 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 303..361 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 349..407 | CDD:290566 | 12/57 (21%) | ||
LRR_4 | 350..390 | CDD:289563 | 7/39 (18%) | ||
leucine-rich repeat | 351..374 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 375..398 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 398..>443 | CDD:290566 | 9/44 (20%) | ||
leucine-rich repeat | 399..422 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 423..443 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 471..494 | CDD:275380 | 8/22 (36%) | ||
LRRCT | 503..554 | CDD:214507 | 14/51 (27%) | ||
lrrtm1 | XP_002935525.1 | LRRNT | 38..>61 | CDD:214470 | 7/30 (23%) |
LRR | 53..>316 | CDD:227223 | 86/341 (25%) | ||
leucine-rich repeat | 70..90 | CDD:275380 | 8/19 (42%) | ||
leucine-rich repeat | 91..114 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 114..173 | CDD:338972 | 16/58 (28%) | ||
leucine-rich repeat | 115..138 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 139..162 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 163..186 | CDD:275380 | 7/46 (15%) | ||
leucine-rich repeat | 187..210 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 211..234 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 235..257 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 258..281 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 282..300 | CDD:275380 | 7/17 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |