DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and lrfn2

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:XP_031758515.1 Gene:lrfn2 / 100491687 XenbaseID:XB-GENE-6035533 Length:765 Species:Xenopus tropicalis


Alignment Length:316 Identity:80/316 - (25%)
Similarity:133/316 - (42%) Gaps:52/316 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 MCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGL 348
            :|.|..::.........|:...:|:.|..:.               |..|.|.|..|:...||.:
 Frog    25 VCQNLSESLGTLCPTKGLLFVPMDIDRRTVE---------------LRLGGNFIISINRQDFANM 74

  Fly   349 RSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIP 413
            ..|..|:|..|.||.:....|.:|.:|.:|.|.:||::::..:.|..|.||..|.:..|.::||.
 Frog    75 TGLVDLTLSRNTISYIQPYSFIDLESLRSLHLDSNRLTNLGDDVFRGLINLQHLIMNNNQLNSIA 139

  Fly   414 ADLFLN-VSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRID 477
            .|.|.: :..|..|.|..|||.|:..|..:.:.||..|.|::|::.......|:.|::|.:|.:.
 Frog   140 EDAFEDLLQTLEDLDLSYNNLKTVPWDAVRRMVNLHQLSLDHNLIYYITEGTFQDLNKLARLDLT 204

  Fly   478 SNKLMFLPHGALHGLKNL-----------VAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQP 531
            ||:|..||...:.....:           :::....||.||:|..|:|.|..||       ....
 Frog   205 SNRLQKLPPDPIFARSQISMTSATPFSPPLSLSFGGNPLHCNCELLWLRRLDRE-------DDME 262

  Fly   532 MCRGPGDLGGHEVGLLRYDD-LC---------------DGQWASM--LSLSPRLPV 569
            .|..|..|.|.....:|.:: :|               :||.||:  .::...|||
 Frog   263 TCASPSALKGRYFWYVREEEFVCEPPLITQYTQRLLVLEGQTASLKCKAVGDPLPV 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064 25/101 (25%)
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566 5/28 (18%)
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380 2/17 (12%)
LRR_8 303..361 CDD:290566 13/57 (23%)
leucine-rich repeat 303..326 CDD:275380 2/22 (9%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
LRR_8 349..407 CDD:290566 18/57 (32%)
LRR_4 350..390 CDD:289563 13/39 (33%)
leucine-rich repeat 351..374 CDD:275380 8/22 (36%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
LRR_8 398..>443 CDD:290566 16/45 (36%)
leucine-rich repeat 399..422 CDD:275380 7/23 (30%)
leucine-rich repeat 423..443 CDD:275380 8/19 (42%)
leucine-rich repeat 471..494 CDD:275380 7/22 (32%)
LRRCT 503..554 CDD:214507 16/66 (24%)
lrfn2XP_031758515.1 LRR_8 51..111 CDD:404697 20/74 (27%)
leucine-rich repeat 53..76 CDD:275380 7/37 (19%)
leucine-rich repeat 77..100 CDD:275380 8/22 (36%)
LRR_8 100..160 CDD:404697 19/59 (32%)
leucine-rich repeat 101..124 CDD:275380 7/22 (32%)
leucine-rich repeat 125..148 CDD:275380 7/22 (32%)
LRR_8 148..208 CDD:404697 19/59 (32%)
leucine-rich repeat 150..173 CDD:275380 8/22 (36%)
leucine-rich repeat 174..197 CDD:275380 6/22 (27%)
LRRCT 241..285 CDD:214507 15/50 (30%)
Ig 288..375 CDD:416386 7/31 (23%)
Ig strand A 288..291 CDD:409353 0/2 (0%)
Ig strand A' 295..298 CDD:409353 0/2 (0%)
Ig strand B 304..312 CDD:409353 2/7 (29%)
Ig strand C 318..323 CDD:409353 1/1 (100%)
Ig strand C' 326..328 CDD:409353
Ig strand D 334..338 CDD:409353
Ig strand E 341..345 CDD:409353
Ig strand F 355..362 CDD:409353
Ig strand G 365..375 CDD:409353
fn3 417..485 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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