DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and lrrn1-like

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001106456.1 Gene:lrrn1-like / 100127637 XenbaseID:XB-GENE-492890 Length:738 Species:Xenopus tropicalis


Alignment Length:491 Identity:124/491 - (25%)
Similarity:206/491 - (41%) Gaps:94/491 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 SRLRSVEQPVWHLATGSQIEWNH----CTSGVC--RCNPDTKSFTCWNTNLKSVPVTQVIPMNMV 184
            :|.:.::.|:| :.|...:...|    .|.|||  :|..:|:.   |.|           |.   
 Frog     7 ARSQRMKPPLW-METCLFVIVLHSVFFSTLGVCPPQCVCETRP---WFT-----------PQ--- 53

  Fly   185 NIDLSRNILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTF 249
                     |..|:        .|.:|.:..:|..:|.:|..|:.   ||.:|:|:   |.|.| 
 Frog    54 ---------SVYHE--------AKTVDCNDLLLTHIPENLSTDIQ---VLLLQSNK---ISHLT- 94

  Fly   250 WKLR---NLNILDLSKNEIGMLPESIFYHAQRLTVINMCDNQIQNFPPNLLRDQLMLEELDMSRN 311
            |:|:   ||..||||:|....:.:....:..:|..:.:.:||::..|...|:|...||||.::.|
 Frog    95 WELQELSNLTELDLSQNHFQSIDDLGVSNLSQLITLYLEENQLRELPDYSLKDLGSLEELYINHN 159

  Fly   312 KISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNLANLV 376
            :||.:...:...|.:|..|....|::..||..:|..|.:|..|.:..|.:::|....|..|..|.
 Frog   160 QISYIGPRAFSGLGRLLRLHLNANRLEIIDPRWFEDLPNLEILMVGENPVTALQSLNFQPLGRLH 224

  Fly   377 TLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDF 441
            :|.|....:.||..|||..|:.|..|....|.::.:|.:...|:..|..|.|..|.:..:...||
 Frog   225 SLVLAGMELEHIPENAFQGLDYLESLSFFDNRLTEVPKEALKNLKLLKFLDLNKNPIPEIRGGDF 289

  Fly   442 QGLNNLKILLLNN-NILKNFDARAFEPLSQLEKLR--------------------------IDSN 479
            .|:.:|:.|.||: ..|:..:|.||:.|.:|.||.                          :::|
 Frog   290 TGMEHLEELSLNSMEELERVEAEAFQDLPELIKLEMCNNPRLSYLDPEAFSSNLGALKTLLLNNN 354

  Fly   480 KLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMCRGPGDLGGH-- 542
            :|..:|......|..|:.:.|..||..|||:..    |.....|:|.:.|..:|..|..:.||  
 Frog   355 RLAMVPLKIFQALPGLLEISLYSNPIRCDCQNC----WKGLSKLRLIEAQATLCINPPLVSGHLF 415

  Fly   543 -----EVGLLRYDDLCDGQWASMLSLSPRLPVRKHQ 573
                 :..|.|...|.|..     .:.|:..:.:||
 Frog   416 QEIQGQAWLNRCPPLIDTH-----LIPPQFQIARHQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 12/58 (21%)
leucine-rich repeat 187..206 CDD:275380 2/18 (11%)
LRR_RI <201..386 CDD:238064 52/187 (28%)
leucine-rich repeat 207..230 CDD:275380 6/22 (27%)
leucine-rich repeat 231..254 CDD:275380 9/25 (36%)
LRR_8 253..313 CDD:290566 18/62 (29%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR_8 303..361 CDD:290566 18/57 (32%)
leucine-rich repeat 303..326 CDD:275380 8/22 (36%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
LRR_8 349..407 CDD:290566 17/57 (30%)
LRR_4 350..390 CDD:289563 11/39 (28%)
leucine-rich repeat 351..374 CDD:275380 6/22 (27%)
leucine-rich repeat 375..398 CDD:275380 9/22 (41%)
LRR_8 398..>443 CDD:290566 11/44 (25%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..443 CDD:275380 6/19 (32%)
leucine-rich repeat 471..494 CDD:275380 7/48 (15%)
LRRCT 503..554 CDD:214507 16/57 (28%)
lrrn1-likeNP_001106456.1 NEL <52..>262 CDD:330839 64/236 (27%)
leucine-rich repeat 60..79 CDD:275380 5/18 (28%)
leucine-rich repeat 80..102 CDD:275380 9/28 (32%)
LRR_8 101..161 CDD:316378 18/59 (31%)
leucine-rich repeat 103..126 CDD:275380 6/22 (27%)
leucine-rich repeat 127..150 CDD:275380 6/22 (27%)
leucine-rich repeat 151..174 CDD:275380 8/22 (36%)
leucine-rich repeat 175..198 CDD:275380 7/22 (32%)
leucine-rich repeat 199..222 CDD:275380 6/22 (27%)
leucine-rich repeat 223..246 CDD:275380 9/22 (41%)
leucine-rich repeat 247..294 CDD:275380 12/46 (26%)
LRR_8 294..356 CDD:316378 13/61 (21%)
leucine-rich repeat 295..319 CDD:275380 9/23 (39%)
leucine-rich repeat 320..345 CDD:275380 3/24 (13%)
leucine-rich repeat 346..367 CDD:275380 3/20 (15%)
PCC 351..>412 CDD:188093 17/64 (27%)
leucine-rich repeat 370..382 CDD:275378 4/11 (36%)
Ig 448..515 CDD:319273
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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