DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and lrrc4b

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001096358.1 Gene:lrrc4b / 100124949 XenbaseID:XB-GENE-5945982 Length:641 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566
leucine-rich repeat 187..206 CDD:275380
LRR_RI <201..386 CDD:238064
leucine-rich repeat 207..230 CDD:275380
leucine-rich repeat 231..254 CDD:275380
LRR_8 253..313 CDD:290566
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR_8 303..361 CDD:290566
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
LRR_8 349..407 CDD:290566
LRR_4 350..390 CDD:289563
leucine-rich repeat 351..374 CDD:275380
leucine-rich repeat 375..398 CDD:275380
LRR_8 398..>443 CDD:290566
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 423..443 CDD:275380
leucine-rich repeat 471..494 CDD:275380
LRRCT 503..554 CDD:214507
lrrc4bNP_001096358.1 LRRNT 42..75 CDD:214470
leucine-rich repeat 73..96 CDD:275380
leucine-rich repeat 97..120 CDD:275380
PPP1R42 100..297 CDD:411060
leucine-rich repeat 121..144 CDD:275380
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..193 CDD:275380
leucine-rich repeat 194..215 CDD:275380
leucine-rich repeat 216..239 CDD:275380
leucine-rich repeat 240..263 CDD:275380
leucine-rich repeat 264..285 CDD:275380
LRRCT 296..346 CDD:214507
I-set 349..438 CDD:400151
Ig strand A 349..352 CDD:409353
Ig strand A' 356..359 CDD:409353
Ig strand B 365..372 CDD:409353
Ig strand C 378..383 CDD:409353
Ig strand C' 386..388 CDD:409353
Ig strand D 397..401 CDD:409353
Ig strand E 404..408 CDD:409353
Ig strand F 418..425 CDD:409353
Ig strand G 428..438 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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