DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7509 and lrrtm4l1

DIOPT Version :9

Sequence 1:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster
Sequence 2:NP_001373591.1 Gene:lrrtm4l1 / 100000724 ZFINID:ZDB-GENE-080327-15 Length:571 Species:Danio rerio


Alignment Length:406 Identity:110/406 - (27%)
Similarity:158/406 - (38%) Gaps:87/406 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 CRCNPDTKSFTCWNTNLKSVPVTQVIPMNMVNIDLSRNILSTLHKDTFRGLTVLKELDISHNVLD 218
            |.|  :.|...|.::..:.||         .||.:|...||..:.|.             |.:  
Zfish    35 CHC--EGKIVHCESSAFQDVP---------ENISVSCQGLSLRYNDL-------------HTM-- 73

  Fly   219 FLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLNILDLSKNEIGMLPESIFYHAQRLTVIN 283
             ||:. |..|:.||.|.:.:||:..:|.|.|..:|.|..|.||.|.|..| .::.:|.       
Zfish    74 -LPYQ-FAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQL-HNVTFHG------- 128

  Fly   284 MCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIAKIDDDFFAGL 348
                     .||       |..||:|.||:.||..|....|.||:.|....|.:..|....|...
Zfish   129 ---------VPN-------LRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLEC 177

  Fly   349 RSLRTLSLHNNRISSLSGTIFNNLANLVTLDLTTNRISHIDGNAFVELNNLNELFLGQNSMSSIP 413
            |||..|.|..||:..|:.|.|..|:.|:.|.|..|:.|.|:...|..|.||..|:|..|.:.::.
Zfish   178 RSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVN 242

  Fly   414 ADLFLNVSALTRLTLFSNNLTTLEADDFQGLNNLKILLLNNNILKNFDARAFEPLSQLEKLRIDS 478
            ..|..:...|.||.:..|.:..|:...||.|.||::                        |.::|
Zfish   243 QGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQV------------------------LNLES 283

  Fly   479 NKLMFLPHGALHGLKNLVAVKLDKNPWHCDCRALYLARWIREFVLKLWDGQQP---MCRGPGDLG 540
            |||..:....:....:|..:.|..|.|.|......|..|::.|     .|.:.   :|..|..|.
Zfish   284 NKLANVSQEVVAAWISLTTISLAGNMWDCGPGICPLVVWLKNF-----RGTKDTNIICSSPKHLQ 343

  Fly   541 GHEV--GLLRYDDLCD 554
            |.:|  ....|.| ||
Zfish   344 GEKVIEASKNYID-CD 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7509NP_647931.1 LRR_8 182..241 CDD:290566 15/58 (26%)
leucine-rich repeat 187..206 CDD:275380 4/18 (22%)
LRR_RI <201..386 CDD:238064 55/184 (30%)
leucine-rich repeat 207..230 CDD:275380 5/22 (23%)
leucine-rich repeat 231..254 CDD:275380 8/22 (36%)
LRR_8 253..313 CDD:290566 16/59 (27%)
leucine-rich repeat 255..278 CDD:275380 8/22 (36%)
leucine-rich repeat 279..302 CDD:275380 2/22 (9%)
LRR_8 303..361 CDD:290566 22/57 (39%)
leucine-rich repeat 303..326 CDD:275380 10/22 (45%)
leucine-rich repeat 327..350 CDD:275380 5/22 (23%)
LRR_8 349..407 CDD:290566 23/57 (40%)
LRR_4 350..390 CDD:289563 16/39 (41%)
leucine-rich repeat 351..374 CDD:275380 9/22 (41%)
leucine-rich repeat 375..398 CDD:275380 8/22 (36%)
LRR_8 398..>443 CDD:290566 12/44 (27%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..443 CDD:275380 6/19 (32%)
leucine-rich repeat 471..494 CDD:275380 5/22 (23%)
LRRCT 503..554 CDD:214507 14/55 (25%)
lrrtm4l1NP_001373591.1 leucine-rich repeat 60..83 CDD:275380 8/39 (21%)
LRR_8 63..118 CDD:404697 22/71 (31%)
leucine-rich repeat 84..107 CDD:275380 8/22 (36%)
LRR_8 106..166 CDD:404697 25/83 (30%)
leucine-rich repeat 108..131 CDD:275380 8/39 (21%)
leucine-rich repeat 132..155 CDD:275380 10/22 (45%)
PPP1R42 153..308 CDD:411060 49/178 (28%)
leucine-rich repeat 156..179 CDD:275380 5/22 (23%)
leucine-rich repeat 180..203 CDD:275380 9/22 (41%)
leucine-rich repeat 204..227 CDD:275380 8/22 (36%)
leucine-rich repeat 228..251 CDD:275380 5/22 (23%)
leucine-rich repeat 252..275 CDD:275380 8/22 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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