DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and FGD3

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_001077005.1 Gene:FGD3 / 89846 HGNCID:16027 Length:725 Species:Homo sapiens


Alignment Length:338 Identity:74/338 - (21%)
Similarity:127/338 - (37%) Gaps:63/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1497 DRDSGQSSMSSL-----SPPPHNFICGG----------------AGKSSGS-DVERQDSGVGSET 1539
            |...|.||:..|     .|..|   ||.                .|:.||| .:..:|||:.|.:
Human    21 DTGPGSSSLGKLQALPVGPRAH---CGDPVSLAAAGDGSPDIGPTGELSGSLKIPNRDSGIDSPS 82

  Fly  1540 SKTSRSKY------QATPTVLHLCEDCDGAVEMQV--------GDNGILYAP------------- 1577
            |..:...:      :|.|:...|....:.|::.||        .|:.:...|             
Human    83 SSVAGENFPCEEGLEAGPSPTVLGAHAEMALDSQVPKVTPQEEADSDVGEEPDSENTPQKADKDA 147

  Fly  1578 LVCRKCGKKRVERKEIITEIVETEEKYGRDLQIILEEFCHPMLVAGLLTQEQLSAIFLNTEDLLE 1642
            .:.:..|.:::  ..|..|::.|||.|.:.|.::.:.||..:..|| :..|.:..||.|...:..
Human   148 GLAQHSGPQKL--LHIAQELLHTEETYVKRLHLLDQVFCTRLTDAG-IPPEVIMGIFSNISSIHR 209

  Fly  1643 -NNQTLAERMRDALDMSLEQGDDDLLTVNIGRIFLDFTQMLHAFESYCVRQAGASLLLANLEKEK 1706
             :.|.|...::..:   .|:.|.:   ..:|.|.......|..:..|......|..|::...:..
Human   210 FHGQFLLPELKTRI---TEEWDTN---PRLGDILQKLAPFLKMYGEYVKNFDRAVGLVSTWTQRS 268

  Fly  1707 ELLRIFLKVSQMENAVLRRMNLNSFLMVPVQRVTKYPLLLARLYKVTPSHLEGRELLKQAQEKIE 1771
            .|.:..:...|.:. |...:.|...::.|||||.:|.|||....|..|.....|:..:::.|.|.
Human   269 PLFKDVVHSIQKQE-VCGNLTLQHHMLEPVQRVPRYELLLKDYLKRLPQDAPDRKDAERSLELIS 332

  Fly  1772 LHLNHINQEAKDV 1784
            ...||.|...:.|
Human   333 TAANHSNAAIRKV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 45/186 (24%)
FGD3NP_001077005.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..151 26/132 (20%)
RhoGEF 160..339 CDD:238091 45/186 (24%)
PH1_FGD3 371..478 CDD:275422
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 487..532
FYVE_FGD3 531..584 CDD:277279
PH2_FGD1-4 598..702 CDD:270056
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 703..725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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