DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and ROM1

DIOPT Version :10

Sequence 1:NP_729032.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_011584.2 Gene:ROM1 / 852961 SGDID:S000003302 Length:1155 Species:Saccharomyces cerevisiae


Alignment Length:1160 Identity:198/1160 - (17%)
Similarity:358/1160 - (30%) Gaps:445/1160 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   893 IKSNRSDSR-----DLFQRRPTEPPPPPPPKGAGKGLEPLPHEI--------------NKSPLSP 938
            :.||..|.|     ::|.::.......|....:|..::...:||              ||:.|..
Yeast     1 MNSNELDLRNKYFYEIFGKKRKSDTSTPTQLFSGSKVQTNINEISITNDEDEDSTEDENKASLKD 65

  Fly   939 QR------TVVRVAPFKPQQQQVGGSGDGFTHEVHRLKISHSEEDADLGVELRRRPNLFLSSPGE 997
            ..      ...|:||            |..:|::....:.|      :...|...|..|..    
Yeast    66 YTLGHDTGARYRIAP------------DCSSHQLKASPVLH------ISTNLNSSPQSFTG---- 108

  Fly   998 EDAAP--KKTSILIS-----GDDCYSTMNLSANAAQPLYQSSVVVNSHSATSVCISVSSAEEQEQ 1055
            :..:|  ||.||..|     |:.|.:|.:.|...:..|...   |..||:.|:.....::.....
Yeast   109 DQISPTNKKISINDSTRQDKGNSCTTTSSPSQKRSNVLLPH---VRKHSSPSLLSFSKNSGSHMG 170

  Fly  1056 ELNQLNTLRSQQMGMGIAIIPIRGASEVNLQRSVSCISSTSSSSTSS-------------SSSSS 1107
            :.|||:|..:          |......:.|..|.:  ...|||||||             ||:||
Yeast   171 DPNQLSTPPT----------PKSAGHTMELHSSFN--GKHSSSSTSSLFALESLKTQNRRSSNSS 223

  Fly  1108 GRGRTLIRLDYDRERKGSATSSTPINTPPVISSTPATPPPTDLPIENANPLVPHETELLKILRNP 1172
            .......|.....:|..|.:.|:|::.             |::.:....|||  ...||.::   
Yeast   224 NHSSQYRRHTNQHQRHHSRSKSSPVSL-------------TEISMIKGTPLV--YPALLSLI--- 270

  Fly  1173 VEAVKLNLVPHVCGLRAPTRESGKSKKIQEEEVSGTPVKDPGFIAKLLQDPMLGQVAEGLETETV 1237
              |:|..                ::.|:...:..|.          |.:|...|:.|    .:|:
Yeast   271 --AIKFK----------------QTIKLSTHKKMGL----------LYRDSFTGKQA----IDTL 303

  Fly  1238 AELIENSLQRLQQARRGIDMSGTK-------DH---DDMNRLISASLQRIRLERQPATPGISATK 1292
            . ||..||.|......|..:...|       ||   |.:..:...|.:.|.:..|          
Yeast   304 C-LIIGSLDRNLGMLIGKSLEAQKLFHDVLYDHGVRDSVLEIYELSSESIFMAHQ---------- 357

  Fly  1293 EEDRLSNRGSISSANSFASAHNYELFDFDGGAGGNESDCYQSCSSELTASGILEEDSVSPIKDPE 1357
                  ::.|.|.||:|:|:                                  ..||:.::   
Yeast   358 ------SQSSTSIANTFSSS----------------------------------SSSVNSLR--- 379

  Fly  1358 TELDAATRAKFYQLLVDATLAEIEHSTHMDQTLGTDSEHHYESIRHSGDPIYEEIHEVPPPLPLS 1422
                  |:.:.|.:.|..|                   |.|.|                      
Yeast   380 ------TKTEIYGVFVPLT-------------------HCYSS---------------------- 397

  Fly  1423 APPLNDAELEKKAARSIFEGASKYDILSYLVDAKERGLAREESFDYGNNPKIIEEEAADTLSDLD 1487
                 ...|||               |.|.:..                |..::::|        
Yeast   398 -----TCSLEK---------------LCYSISC----------------PNRLQQQA-------- 418

  Fly  1488 KRQAEERERDRDSGQSSMSSLSPPPHNFICGGAGKSSGSDVERQDSGVGSETSKTSRSKYQATPT 1552
                               :|    |..:.||..::....::::|....|.|:...:|.:::   
Yeast   419 -------------------NL----HLKLGGGLKRNISLALDKEDDERISWTNSVPKSVWES--- 457

  Fly  1553 VLHLCEDCDGAVEMQVGDNGILYAPLVCRKCGKKRVERKEIITEIVETEEKYGRDLQIILEEFCH 1617
                                          ..|::::|:|.|.|:..||:|:.:.|:||.:.|..
Yeast   458 ------------------------------LSKQQIKRQEAIYELFTTEKKFVKSLEIIRDTFMK 492

  Fly  1618 PMLVAGLLTQEQ----LSAIFLNTEDLLENNQTLAERMRDALDMSLEQGDDDLLTVNIGRIFLDF 1678
            .:|...::..:.    :..:|.:..::...|:...:.:.....:|       .:...|..|||.:
Yeast   493 KLLETNIIPSDVRINFVKHVFAHINEIYSVNREFLKALAQRQSLS-------PICPGIADIFLQY 550

  Fly  1679 TQMLHAFESYCVRQAGASLLLANLEKEKELLRIFLKV-SQMENAVLRRMNLNSFLMVPVQRVTKY 1742
            ......|.||...:..|..|   :|.::.:...|.:. .::.|:.||. .::|||...|.|..:|
Yeast   551 LPFFDPFLSYIASRPYAKYL---IETQRSVNPNFARFDDEVSNSSLRH-GIDSFLSQGVSRPGRY 611

  Fly  1743 PLLLARLYKVTPSHLEGRELL---KQAQEKIELHLNHINQEAKDVPTKLWRRISSSSPNRRASCE 1804
            .||:             ||::   ....:|.:|.:   ..:.:|:...|.:||     :|.:...
Yeast   612 SLLV-------------REIIHFSDPVTDKDDLQM---LMKVQDLLKDLMKRI-----DRASGAA 655

  Fly  1805 IDMINIKLRKMAIDV------LEWNHDEVRFAMEGRLLYTQPTDSNWKKARTIKLTPVNALLVTN 1863
            .|..::|:.|..|..      |..|:::.:...||.|                            
Yeast   656 QDRYDVKVLKQKILFKNEYVNLGLNNEKRKIKHEGLL---------------------------- 692

  Fly  1864 GKPSANYRAEKAMSEKLNFPKHTGIREASLLLVKEKC----GRYTLIREPLYLDRCVVCSEADWD 1924
            .:...| :.:.:.|..:.|    .:.:..||.:|.|.    .::|:.:.|:.|....:|...|..
Yeast   693 SRKDVN-KTDASFSGDIQF----YLLDNMLLFLKSKAVNKWHQHTVFQRPIPLPLLFICPAEDMP 752

  Fly  1925 D---YF-------------EVQEISSKDTFIFKAEDGVRTKQWYTQLQYHAQGMG 1963
            .   |.             :.|..:.|:..:| |..|  |||.|....|..|..|
Yeast   753 PIKRYVTENPNCSAGVLLPQYQTSNPKNAIVF-AYYG--TKQQYQVTLYAPQPAG 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_729032.1 RhoGEF 1590..1778 CDD:238091 41/195 (21%)
ROM1NP_011584.2 ROM1 1..1155 CDD:227709 198/1160 (17%)

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