DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and plekhg5b

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_017209177.1 Gene:plekhg5b / 796404 ZFINID:ZDB-GENE-090908-6 Length:1110 Species:Danio rerio


Alignment Length:1002 Identity:194/1002 - (19%)
Similarity:339/1002 - (33%) Gaps:294/1002 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   980 LGVELRRRPNLFLSSPGEEDAAPKKTSILISGDDCYSTMNLSANAAQPLYQSSVVVNSHSATSVC 1044
            ||:.||....   ||..||       .:|....||                    .....|:.||
Zfish    21 LGIRLRLHEK---SSQDEE-------CVLCQHPDC--------------------PKRRHASKVC 55

  Fly  1045 ISVSSAEEQEQELNQLNTLRSQQMGMGIAIIPIRGASEVNLQRSVSCISSTSSSSTSSSSSSSGR 1109
                 .....||||                    |.|.::|     |.|..|......|.|    
Zfish    56 -----HHPDCQELN--------------------GKSPLHL-----CESCDSRCHLDESDS---- 86

  Fly  1110 GRTLIRLD----YDRERKGS------ATSSTPINTPPVISSTPATPPPTDLPIENANPLVPHETE 1164
                :..|    :|.:.:||      :|.|.|          |.|.||:||          .|.|
Zfish    87 ----MHFDRHPRFDVQPQGSILARNVSTRSCP----------PRTSPPSDL----------EEDE 127

  Fly  1165 LLKILRNPVEAVKLNLVPHVCGLRAPTRESGKSKKIQEEEVSGTPVKDPGFIAKLLQDPMLGQVA 1229
            .....|...:|         .||:...||..|.::...:    .|.::...:...|...:..::.
Zfish   128 EASTERGERKA---------GGLKLKAREGNKPRRHHTD----NPRRECFSLKFDLNIDIDTEIV 179

  Fly  1230 EGLETETVAELIENSLQRLQQARRGIDMSGTKDH-DDMNRLISASLQRIRLE----RQPATPGIS 1289
            ..::.:|:.|::....:     |:||::...... |..|..:|...:..|..    :..|.||  
Zfish   180 PAVKKKTLREVLGPIFE-----RKGIELFRVDLFLDQSNTPLSLDFEAFRFGGRYLKVKARPG-- 237

  Fly  1290 ATKEEDRLSNRGSISSANSFASAHNYELFDFDGGAGGNESDCYQSCSSELTASGILEEDSVSPIK 1354
                 |.|....|:....|.:      |.:.....||:   .|     .||.:....|.|..|.:
Zfish   238 -----DELKVEQSVKDLRSLS------LPNIKPSVGGS---VY-----ILTPATDKPEHSSLPRR 283

  Fly  1355 DPETELDAATRAK-FYQLLVDATLAEIEHSTHMDQTLGTDSEHHYESIRHSGDPIYEEIHEVPPP 1418
            |....|..|.|.| ..|.|.||::..::....:..:|.|                      ..|.
Zfish   284 DSVDILGQARRTKDMKQFLGDASIPSMDTLALLGGSLPT----------------------AAPG 326

  Fly  1419 LPLSAPPLNDAELEKKAARSIFEGASKYDILSYLVDAKERGLAREESFDYGNNPKIIEEEAADTL 1483
            ..|:|.| |:.:.......|||.||.    ....||..:....:.:::.....||:..:.|... 
Zfish   327 GSLTAGP-NNCKNRPPNRFSIFFGAG----AEKEVDRVQLLNTKLQAYSQFGLPKLPPQLAFHQ- 385

  Fly  1484 SDLDKRQAEERERDRDSGQSSMSSLSPPPHNFICGGAGKSSGSDVERQDSGVGSETSKTSRSKYQ 1548
               |..:.||.|.:.....|..:.|..|                            ...||.::|
Zfish   386 ---DSWEEEEEEPNLTLEDSWRTLLDDP----------------------------ESLSRRQFQ 419

  Fly  1549 ATPTVLHLCEDCDGAVEMQVGDNGILYAPLVCRKCGKKRVERKEIITEIVETEEKYGRDLQIILE 1613
                                                     ::|.|.|:::||..|.:.|::|.:
Zfish   420 -----------------------------------------QQEAIWELIQTEATYIKKLRVITD 443

  Fly  1614 EFCHPMLVA---GLLTQEQLSAIFLNTEDLLENNQTL-AERMRDALDMSLEQGDDDLL-TVNIGR 1673
            .|...:|..   .||.:.:.:.:|.|.:|::..:.|| .:.|..||:.:  :|...|: ..::..
Zfish   444 LFLCGLLNLQDNSLLGEVEPTRLFSNIQDIVRLHCTLWVQVMFPALEKA--RGSRSLIEPTDLQE 506

  Fly  1674 IFLDFTQMLHAFESYCVRQAGASLLLANLEKEKELLRIFLKVSQMENAVLRRMNLNSFLMVPVQR 1738
            .|..|......:..||:.:......:.:|.::.||.:|::..:: .|....|:.|...|:.|.||
Zfish   507 GFSTFASRFQPYIRYCMEEESCMEYMRSLLRDNELFKIYITWAE-TNKQCNRLKLADMLVKPHQR 570

  Fly  1739 VTKYPLLLARLYKVTPSHLEGRELLKQAQEKIELHLNHINQEAKDVPTKLWRRISSSSPNRRASC 1803
            :|||||||..:.|.|... ..|:.|......:|..:|.::.:.:....:  ::::::|       
Zfish   571 LTKYPLLLKTILKKTEDQ-ASRDALNNMVACVEGFINGVDSQMRQRQEQ--QKLAATS------- 625

  Fly  1804 EIDMINIKLRKMAIDVLEWNHDEVRFAME--GRLLYTQP-TDSNWKKARTIKLTPVNALLVTNGK 1865
                    .|..:.:.:|...:||..|::  .|:..|.| ..::.::.|.:.|.  .||.:..||
Zfish   626 --------ARVESYEAVEGASEEVEKALKEFSRIDLTAPMIGTSPEETRQLHLE--GALRMKEGK 680

  Fly  1866 PSANYRAEKAMSEKLNFPKHTGIREASLLLVK--EKCGRYTLIREPLYLDRCVVCSEADWDDYFE 1928
            .|             ....:..:....||:.|  ::..:..::|:||.|.. |||.|......|.
Zfish   681 DS-------------RMDAYCFLFTDLLLITKPVKRLEKVKVVRQPLLLHN-VVCRELKDPGSFV 731

  Fly  1929 VQEI----SSKDTFIFKAEDGVRTKQW 1951
            :..:    |:...:.|:|....:.|.|
Zfish   732 LIYLNEFKSAVAAYTFQANSAAQGKSW 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 49/190 (26%)
plekhg5bXP_017209177.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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