DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and plekhg5a

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_009304320.1 Gene:plekhg5a / 562861 ZFINID:ZDB-GENE-060503-766 Length:1157 Species:Danio rerio


Alignment Length:644 Identity:147/644 - (22%)
Similarity:252/644 - (39%) Gaps:149/644 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1386 MDQTLGTDSEHHYESIRHSGDPIYEEIHEVPPPLPLSAPPLNDAELEK--KAARSIFEGASKYDI 1448
            :||: .|.....:|:.|..|       |.    |.:.|.|..|..:|:  |..||:         
Zfish   220 LDQS-NTPLSLGFEAYRFGG-------HY----LRVRARPGEDLRVERCVKDPRSL--------- 263

  Fly  1449 LSYLVDAKERGLAREESFDYGNNPKIIEEEAADTLSDL-------DKRQAEERER---------D 1497
              .|...:........|.|...:..:...||||.|..|       .|...:.|.|         .
Zfish   264 --SLPIMRSSSNTHSSSTDRAEHGSLGRREAADLLVGLVGHAAYIQKNGGQTRRRKNMPEFLGDS 326

  Fly  1498 RDSGQSSMSSLSPPPHNFICG-------GAGKSSGSDVERQDSG-VGSETSKTS--RSK-YQAT- 1550
            ..|.|.|:|.||......|.|       .|.:.||.......:| :|.|..:..  :|| |..| 
Zfish   327 SISNQDSLSQLSGSLPGSITGPDRWRNRAASRFSGLFSSNSGNGSLGKECDRVEQLQSKLYSYTM 391

  Fly  1551 ------PTVLHLCEDC---DGAVEMQVGDNGILYAP--LVCRKCGKKRVERKEIITEIVETEEKY 1604
                  |..|....|.   :..:|::.....:|..|  |..|:|     .::|.|.|:::||..|
Zfish   392 FGLPKMPPQLSFHRDSWEEEPNLELEESWKQLLENPEILTRRQC-----HQQEAIWELLQTESDY 451

  Fly  1605 GRDLQIILEEFCHPML---VAGLLTQEQLSAIFLNTEDLLENNQTL-AERMRDALDMSLEQGDDD 1665
            .:.|.:|.:.|...:|   .:||||:.:.:.:|.|.:|:::.:.:| .|.|..||:.:.::    
Zfish   452 IKKLHVITDLFLCGLLNLQESGLLTEVEPTRLFSNIQDIVQLHSSLWTEVMLPALEKARQK---- 512

  Fly  1666 LLTVNIGRIFLDFTQMLHAFES----------YCVRQAGASLLLANLEKEKELLRIFLKVSQMEN 1720
                   |..|:.|::...|.:          ||:.:.|....:..|.|:.||.||::..::...
Zfish   513 -------RTMLNPTELHQGFSTFGFRFKPYIRYCMEEEGCMEYMRTLLKDNELFRIYVTWAETHK 570

  Fly  1721 AVLRRMNLNSFLMVPVQRVTKYPLLLARLYKVT---PSHLEGRELLKQAQEKIELHLNHI----- 1777
            . ..|:.|...|:.|.||:|||||||..:.|.|   |:    ||.:.:....:|..:|.:     
Zfish   571 Q-CNRLKLTDMLVKPHQRLTKYPLLLKSVLKKTDDPPT----REAINRMVAAVECFINSVDSQMR 630

  Fly  1778 NQEAKDVPTKLWRRISSSSPNRRASCEIDMINIKLRKMAIDVLEWNHDEVRFAMEGRLLYTQPTD 1842
            ::|.|.....:..||.:......||.|::.|          :.|:|:    |.:...::...|.:
Zfish   631 HREEKQKLAAIAGRIEAYEAVEGASEEVERI----------LKEYNN----FDLMAPVMGAPPEE 681

  Fly  1843 SNWKKARTIKLTPVNALLVTNGKPSANYRAEKAMSEKLNFPKHTGIREASLLLVK--EKCGRYTL 1905
                   |.:|....||.:..||.|             ....:..:....||:.|  ::..:..:
Zfish   682 -------TRQLLLEGALKMKEGKES-------------RMDVYCFLFTDVLLITKPVKRVEKVKV 726

  Fly  1906 IREPLYLDRCVVCSEADWDDYFEVQEIS----SKDTFIFKAEDGVRTKQWYTQLQYHAQ 1960
            ||:||.:.. |||.|......|.:..::    :..::.|:|..|.:.:.|...: |:||
Zfish   727 IRQPLVIHN-VVCRELKDPGSFLLIYLNEFGCAVASYCFQANSGAQGRSWIEAI-YNAQ 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 54/207 (26%)
plekhg5aXP_009304320.1 UNC-79 <52..>126 CDD:291442
RhoGEF 440..626 CDD:279015 54/201 (27%)
PH_PLEKHG5_G6 683..781 CDD:270064 22/112 (20%)
PH 685..779 CDD:278594 22/107 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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