DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and arhgef2

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_021328624.1 Gene:arhgef2 / 561276 ZFINID:ZDB-GENE-030717-1 Length:872 Species:Danio rerio


Alignment Length:686 Identity:130/686 - (18%)
Similarity:249/686 - (36%) Gaps:142/686 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1271 SASLQRIRLERQPATPGISATKEEDRLSNRGSISSANSFASAHNYELFDFDGGAGGNESDCYQSC 1335
            |..|.:.|.||.......:..||..:...:.:....:.:::.|.:.....      :.:....:|
Zfish     5 SEPLPKARQERMKDNNAKNKEKERMKAREKETKERESRYSNGHLFTSLSV------SATTLCSAC 63

  Fly  1336 SSELTASGILEEDSVSPIKDPETELDAATRAKFYQLLVDATLAEIEHSTHMDQ--TLGTDSEHHY 1398
            :..:||.        ..:..|...:....|.:       .|||.........|  .||.::...:
Zfish    64 NKSITAK--------EALSCPTCNVTIHNRCR-------DTLANCAKMKQKQQRLALGRNTATLH 113

  Fly  1399 ESIRHSGDPIYEEIHEVPPPLPLSAPPLNDAELEKKAAR---SIFEGASKYDILSYLVDAKERGL 1460
            .....|.:||   :.|.|......:..|..:.|..:..|   |:.:..|..:|...|.|....||
Zfish   114 NVALRSKNPI---LKERPSSAIYPSETLRQSFLGSRKGRSSLSLNKSVSTNNIAGSLNDDSPIGL 175

  Fly  1461 AREESFDYGNNPKIIEEEAADTLSDLDKRQAEERERDRDSGQSSMSSLSPPPHNFICGGAGKSSG 1525
            .|            |...:.|:|:  .:.:|...|...|.|::..:|:.                
Zfish   176 RR------------ILSHSTDSLN--FRNRAMSMESLNDEGETYYTSMM---------------- 210

  Fly  1526 SDVERQDSGVGSET-SKTSRSKYQATPTVLHLCEDCDGAVEMQVGDNGILYAPLVCRKCGKKRVE 1589
            .::||......::: |....|.|..:..                                |..::
Zfish   211 EELERDGKDFAADSWSLAVDSSYLQSQR--------------------------------KDVIK 243

  Fly  1590 RKEIITEIVETEEKYGRDLQIILEEFCHPMLVAGLLTQEQLSAIFLNTEDLLENNQTLAERMRDA 1654
            |:::|.|:::||..:.|.|:|:...|...||...::....:.|||...:.||..:.....::...
Zfish   244 RQDVIYELIQTEFNHVRTLRIMEGVFRRGMLEEVMMEMGVVHAIFPCLDQLLLIHTNFLSQLLQR 308

  Fly  1655 LDMSLEQGDDDLLTV-NIGRIFLD-FT-----QMLHAFESYCVRQAGASLLLAN-LEKEKELLRI 1711
            ...||....:...|: .:|.|.:: |:     .|...:..:|.|...|..|... |.::|...:.
Zfish   309 RSNSLASNSNRNFTIQKLGDILVEQFSGQNAEDMRKCYVEFCSRHLKAVKLYKELLARDKRFQQF 373

  Fly  1712 FLKVSQMENAVLRRMNLNSFLMVPVQRVTKYPLLLARLYKVTPSHLEGRELLKQAQEKIELHLNH 1776
            ..:||:  .::|||..:...:::..||:||||:|:.|:...|..:.|..:.|.|:...|...|..
Zfish   374 IRRVSR--GSLLRRHGVQECILLVTQRITKYPVLMQRILDNTKGNEEESKSLAQSLTLIRELLCS 436

  Fly  1777 INQEAKDVPTKLWRRISSSSPNRRASCEIDMINI-----KLRKMAIDVLEWNHDEVRFAMEGRLL 1836
            ::|:.:::......:...|..:.||..::....:     .||:..|.             ||.||
Zfish   437 VDQQVQELERAQRLQEIQSRLDPRAETKVKGGGVFHGAELLRRGLIH-------------EGALL 488

  Fly  1837 YTQPTDSNWKKARTIKLTPVNALLVTNGKPSANYRAEKAMSEKLNFPKHTGIREASLLLVKEKCG 1901
                    ||.|:..:|..|:.||:|:   ...:..||  .:|..||.   :.:.|:|     |.
Zfish   489 --------WKTAQGSRLKDVHVLLMTD---VLVFMQEK--DQKYVFPT---LDKPSVL-----CL 532

  Fly  1902 RYTLIREPLYLDR-CVVCSEADWDDYFEVQEISSKD 1936
            :..::|:.....| ..:.|.:...:.:|:...|..|
Zfish   533 QNLIVRDIANQQRGMFLISHSTPPEMYELHAASKDD 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 47/193 (24%)
arhgef2XP_021328624.1 C1 47..92 CDD:237996 8/65 (12%)
RhoGEF 244..438 CDD:238091 48/195 (25%)
PH-like 478..595 CDD:327399 28/125 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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