DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGEF64C and Arhgef15

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_008766014.1 Gene:Arhgef15 / 287418 RGDID:1306961 Length:850 Species:Rattus norvegicus


Alignment Length:924 Identity:177/924 - (19%)
Similarity:317/924 - (34%) Gaps:301/924 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1125 SATSSTPINTPPVISS--TPATPPPT------------DLPIENANPLVPHETELLKILRNPVEA 1175
            ||:..|.|...|...|  .||..||:            |.|....:|             :||..
  Rat    54 SASVCTSIFWEPPTGSLKPPALLPPSVSRASLDSQTSPDSPSSTPSP-------------SPVSR 105

  Fly  1176 VKLNLVPHVCGLRAPTRESGKSKKIQEEEVSGTPVKD-----PGFIAKLLQDPMLGQVAEGLETE 1235
            ..::..|..|....|.:.||.|:  ....:...|::|     ||.:.:|     .|:...|.|.:
  Rat   106 RSISPEPAPCSPVPPPKPSGSSR--TPLPLGPVPLQDGSASAPGTVRRL-----AGKFEWGAEGK 163

  Fly  1236 TVAELIENSLQRLQQARRGIDMSGTKDHDDMNRLISASLQRIRLERQPATPGISATKEEDRLSNR 1300
            ..:   .:||:|..|.  ..|::|.|:          :||          .|:|           
  Rat   164 AQS---ADSLERCSQG--STDVNGEKE----------TLQ----------VGLS----------- 192

  Fly  1301 GSISSANSFASAHNYELFDFDGGAGGNESDCYQSCSSELTASGILEEDSVSPIKDPETELDAATR 1365
            |:.|..|....|           |......|  .|...:...|:  |....|:...:..|.|..|
  Rat   193 GNGSQENGTPDA-----------ALACPPCC--PCVCHVAKPGL--ELRWVPVGSSDDILRAPCR 242

  Fly  1366 AKFYQLLVDATLAEIEHSTHMDQTLGTDSEHHYESIRHSGDPIYEEIHEVPPPLPLSAPPLNDAE 1430
            |                                       .|:......:.||: :|.||:    
  Rat   243 A---------------------------------------SPLRASRSRINPPV-ISHPPV---- 263

  Fly  1431 LEKKAARSIFEGASKYDILSYLVDAKERGLAREESFDYGNNPK-IIEEEAADTLSDLDKRQAEER 1494
                 ..:.:...::..:|..|...|...: |:::...|..|: .:|..:.|.:....|  |.|.
  Rat   264 -----VLTSYRSTAERKLLPPLKPPKPTRV-RQDTSTSGELPQPDLELPSEDGIQAAPK--AWEG 320

  Fly  1495 ERDRDSGQSSMSSLSPPPHNFICGGAGKSSGS--------DVERQDS----------------GV 1535
            :|..::.|:     :|||   :.....:..|.        ::..||.                ||
  Rat   321 DRPEEAPQN-----APPP---VALEGREEEGLEGLKELQWELPLQDEPLYQTYRAAVLSEELWGV 377

  Fly  1536 GSETSKTSRSKYQATPTVLHLCEDCDGAVEMQVGDNGILYAPL-VCRKCG--------KKRVERK 1591
            |.:...:..:..:| ||...|           .|....|:..| ..|..|        ::|::  
  Rat   378 GEDGGPSPANPGEA-PTFSRL-----------PGPRNTLWQELPAVRGSGLLESLSPQERRMQ-- 428

  Fly  1592 EIITEIVETEEKYGRDLQIILEEFCHPMLVAGLLTQEQLSAIFLNTEDLLENNQ----TLAERMR 1652
            |.:.|:|.:|..|.|.|:::.:.|.....:...||......:|.|.:.:...::    ||..|:|
  Rat   429 ESLFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQSVSERFLGTLLSRVR 493

  Fly  1653 DALDMSLEQGDDDLLTV----NIG--RIFLDFTQ-MLHAFESYCVRQAGASLLLANLEKEKELLR 1710
            .:..:|      ||..|    .:|  .:::|:.: ..:..|:|      :.|:..|:....||.|
  Rat   494 SSPHIS------DLCDVVHAHAVGPFSVYVDYVRNQQYQEETY------SRLMDTNVRFSAELRR 546

  Fly  1711 IFLKVSQMENAVLRRMNLNSFLMVPVQRVTKYPLLLARLYKVTPSHLEGRELLKQAQEKIELHLN 1775
            : ..:.:.|     |:.|.|||::|.||:|:..:||             :.:|.|.:|......|
  Rat   547 L-QSLPKCE-----RLPLPSFLLLPFQRITRLRMLL-------------QNILSQTEEGSSRQEN 592

  Fly  1776 HINQEAKDVPTKLWRRISSSSPNRRASCEIDMINIKLR---KMAIDVLEWNHDEVRFAMEGRLLY 1837
              .|:|....:|:..|.|:.....:.:.|:..:..:||   ..|:.::.|:.   |..::|.|  
  Rat   593 --AQKALGAVSKIIERCSAEVGRMKQTEELIRLTQRLRFHKVKALPLVSWSR---RLELQGEL-- 650

  Fly  1838 TQPTDSNWKKARTI-----KLTPV------NALLVTNGKPSANYR------AEKAMSEKLNFPKH 1885
               |:...::...:     :.||:      :.||:|  :|.:..|      |.:::.:....|..
  Rat   651 ---TELGCRRGGVLFTSRPRFTPLCLLLFSDLLLIT--QPKSGQRLQVLDYAHRSLVQAQQVPDP 710

  Fly  1886 TGIREASLLLVKEKCGRYT--LIR------------------------EPLYLD-RC--VVCSEA 1921
            :|.....|.|:....||.|  |::                        :.:|.| .|  .:|||.
  Rat   711 SGPPTFRLSLLSNHQGRPTHRLLQAASLSDMQRWLGAFPTPGPLPCSPDTIYEDCECSQELCSEP 775

  Fly  1922 DWDDYFEVQEISSK 1935
            ......|.|.:.||
  Rat   776 STPSKTEGQSLESK 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 44/196 (22%)
Arhgef15XP_008766014.1 RhoGEF 431..607 CDD:279015 47/208 (23%)
PH_ephexin 631..751 CDD:269929 22/129 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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