DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and Arhgef16

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_011248543.1 Gene:Arhgef16 / 230972 MGIID:2446219 Length:721 Species:Mus musculus


Alignment Length:669 Identity:128/669 - (19%)
Similarity:218/669 - (32%) Gaps:206/669 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1416 PPPLPLSAPPLNDAELEKKAARSIFEGASKY--DILSYLVDAKERGLAREESFDYGNNPKIIEEE 1478
            |||.|....|.....|..::..::..|..:.  ..|:....||.:..||.:||    ...::.:|
Mouse    68 PPPSPEDEEPPRPIVLSTQSPAALKMGTQQLIPKSLAVASKAKTKSPARHQSF----GAAVLSKE 128

  Fly  1479 AAD-----------TLSDLDKRQAE----ERERDRDSGQSSMSSLSPPPHNFICGGAGKSSGSDV 1528
            ||.           :|.|:|.....    .|.....|.:::|....||          .|.|..|
Mouse   129 AARRNPQLFSAPSFSLDDMDMDMVTTGNLRRNLRNQSYRAAMKGPGPP----------SSKGDSV 183

  Fly  1529 E-------------RQDSGVGSETSKT------SRSKYQATPTVLH----------------LCE 1558
            :             :..|...::..||      .:..::..|.:..                :.:
Mouse   184 QLGPKLQALAEEAAQPPSRYPAKNKKTLGRKRAHKGSFKDDPQLYQEIRERGLNTSHESDDDILD 248

  Fly  1559 DCDGAVEMQVGDNGIL---YAPL--------------VCRKCGKKRVERKEIITEIVETEEKYGR 1606
            :..|.|..|..|..|:   |.|.              |......:..:|:|.|.||:.:|..|..
Mouse   249 EPSGPVGTQRADTTIVVKSYRPAQLTWSQLPEVLESGVLDTLSTEERKRQEAIFEILTSEFSYLH 313

  Fly  1607 DLQIILEEFCHPMLVAGLLTQEQLSAIFLNTEDLLENNQTLAERMRDALDMSLEQGDDDLLTV-N 1670
            .|.|::.||.....:...:||.:...:|.|..|::..:|...|        :|||.....:.| :
Mouse   314 SLSILVTEFLQSRELRATMTQTEHHHLFSNILDVMSASQKFFE--------ALEQRHKAQVCVED 370

  Fly  1671 IGRIFLDFTQ-MLHAFESYCVRQAGASLLLANLEKEKELLRIFLKVSQMENAVLRRMNLNSFLMV 1734
            |..|..|..| ..|.:.:||..:......|..|.......|..||..:...| ...:.:.|||::
Mouse   371 ISDILEDHAQHHFHPYIAYCSNEVYQQRTLQKLSNSNAAFRDVLKEIEKRPA-CGGLPMISFLIL 434

  Fly  1735 PVQRVTKYPLLLARLYKVTPSHLEGRELLKQAQEKIELHLNHINQEA------------------ 1781
            |:||||:.|||...|...|..|.|..:...||.:.|...:...|:.|                  
Mouse   435 PMQRVTRLPLLTDTLCLKTQGHPERYKAASQALKAISKLVKQCNEGAHKMERTEQIYTLNMQLDF 499

  Fly  1782 ---KDVP-------------------TKLWRRISSSSPNRRASCEI----DMINIKLRK-----M 1815
               |.:|                   :.::|:|:|     |.:|.:    |::.:..:|     :
Mouse   500 GKVKSLPLISASRWLLKRGELFLLEESSIFRKIAS-----RPTCYLFLFNDVLVVTKKKSEESYL 559

  Fly  1816 AIDVLEWNHDEVRFAMEGRLLYTQPTDSNWKKARTIKLTPVNALLVTNGKPSANYRAEKAMSEKL 1880
            ..|..:.:|.:||                       ||.|...||     |..:.|     |..:
Mouse   560 VQDYAQLDHVQVR-----------------------KLEPSEPLL-----PGGSSR-----SSSV 591

  Fly  1881 NFPKHTGI------REASLLLVKEKCGRYTLIREPLYLDR-----CVVCSEADWD---DYFEVQE 1931
            .:|....:      |:..:||..:...           ||     .:...|..|.   :..|:.:
Mouse   592 PYPFQVNLLHNSEGRQEQILLSSDSAS-----------DRARWITALTYKERQWQGITNKGELPQ 645

  Fly  1932 ISSKDTFIFKAEDGVRTKQ 1950
            :.....:..|..|.:..:|
Mouse   646 VEVTKAYFAKQADEITLQQ 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 51/187 (27%)
Arhgef16XP_011248543.1 RhoGEF 300..478 CDD:366202 51/186 (27%)
PH_ephexin 501..634 CDD:269929 28/181 (15%)
SH3_ARHGEF16_26 645..696 CDD:212871 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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