DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and FGD1

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_004454.2 Gene:FGD1 / 2245 HGNCID:3663 Length:961 Species:Homo sapiens


Alignment Length:626 Identity:128/626 - (20%)
Similarity:218/626 - (34%) Gaps:177/626 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1407 PIYEEIHEVPPPL-PLSAPPLNDAELEKKAARSI---FEGASKYDILSYLVDAKERGLAREESFD 1467
            |.|.::..:|||| |:..||......:.:.|:.:   .|.:.....:|.|::..||     |...
Human   165 PSYLQMPRMPPPLEPIPPPPSRPLPADPRVAKGLAPRAEASPSSAAVSSLIEKFER-----EPVI 224

  Fly  1468 YGNN-------------------------PKIIEEEAADTLSDLDKRQAE-ERERDRDSGQSSMS 1506
            ..::                         |::.|.||:..|..|.....: |:..:||||..|:|
Human   225 VASDRPVPGPSPGPPEPVMLPQPTSQPPVPQLPEGEASRCLFLLAPGPRDGEKVPNRDSGIDSIS 289

  Fly  1507 SLS------------PPPHNFICGG-----------------AGKSSGSDVERQDSGVGSETSKT 1542
            |.|            ||.|: :|.|                 ..:...||:|.:|    .|..:.
Human   290 SPSNSEETCFVSDDGPPSHS-LCPGPPALASVPVALADPHRPGSQEVDSDLEEED----DEEEEE 349

  Fly  1543 SRSKYQATPTVLHLCEDCDGAVEMQVGDNGILYAPLVCRKCGKKRVERK--EIITEIVETEEKYG 1605
            .:.:....|.:     :...:||:                    .|::|  .|..|:::||:.|.
Human   350 EKDREIPVPLM-----ERQESVEL--------------------TVQQKVFHIANELLQTEKAYV 389

  Fly  1606 RDLQIILEEFCHPMLVAGLLTQ---------EQLSAIFLNTEDLLENNQTLAERMRDALDMSLEQ 1661
            ..|.::.:.||     |.||.:         :.:..||.|...:...:|   :.:...|:..:|:
Human   390 SRLHLLDQVFC-----ARLLEEARNRSSFPADVVHGIFSNICSIYCFHQ---QFLLPELEKRMEE 446

  Fly  1662 GDDDLLTVNIGRIFLDFTQMLHAFESYCVRQAGASLLLANLEKEKEL-LRIFLKVSQMENAVLRR 1725
            .|   ....||.|.......|..:..| |:....::.|.|...|:.. .::.:...|.|.| ...
Human   447 WD---RYPRIGDILQKLAPFLKMYGEY-VKNFDRAVELVNTWTERSTQFKVIIHEVQKEEA-CGN 506

  Fly  1726 MNLNSFLMVPVQRVTKYPLLLARLYKVTPSHLEGRELLKQAQEKIEL---HLNHINQEAKDVP-- 1785
            :.|...::.||||:.:|.||| :.|.:...|  |....|.||:.:||   ...|.|...:.:.  
Human   507 LTLQHHMLEPVQRIPRYELLL-KDYLLKLPH--GSPDSKDAQKSLELIATAAEHSNAAIRKMERM 568

  Fly  1786 ---TKLWRRISSS----SPNRRASCEIDMINIKLRKMAIDVLEWNHDEVRFAMEGRLLYTQPTDS 1843
               .|::..:...    ||.:....|..::.:..:...      ..|........||||..|   
Human   569 HKLLKVYELLGGEEDIVSPTKELIKEGHILKLSAKNGT------TQDRYLILFNDRLLYCVP--- 624

  Fly  1844 NWKKARTI-KLTPVNALLVTNGKPSANYRAEKAMSEKLNFPKHTGIREASLLLVKEKCGRYTLIR 1907
               :.|.: :...|.|.:..:|       .|...|..||.|:        ..||..|       :
Human   625 ---RLRLLGQKFSVRARIDVDG-------MELKESSNLNLPR--------TFLVSGK-------Q 664

  Fly  1908 EPLYLDRCVVCSEADWDDYFEVQEISSKDTFIFKAEDGVRT 1948
            ..|.|.......:.||     ||.|:|.   :.|.|..:.|
Human   665 RSLELQARTEEEKKDW-----VQAINST---LLKHEQTLET 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 48/198 (24%)
FGD1NP_004454.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..353 41/197 (21%)
SH3-binding. /evidence=ECO:0000255 171..187 7/15 (47%)
RhoGEF 376..559 CDD:238091 48/198 (24%)
PH1_FGD1 591..698 CDD:275392 30/149 (20%)
PH 591..688 CDD:278594 27/138 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 702..726
FYVE_FGD1_2_4 725..789 CDD:277280
PH2_FGD1-4 815..920 CDD:270056
PH 823..921 CDD:278594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 925..961
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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