DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and Arhgef2

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_006501121.1 Gene:Arhgef2 / 16800 MGIID:103264 Length:1185 Species:Mus musculus


Alignment Length:420 Identity:96/420 - (22%)
Similarity:176/420 - (41%) Gaps:87/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1585 KKRVERK-EIITEIVETEEKYGRDLQI--------ILEEF-CHPMLVAGLL-TQEQLSAI---FL 1635
            ||.|.:| ::|.|:::||..:.|.|:|        :|||. ..|.:|.||. ..::||.|   ||
Mouse   431 KKEVMKKQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQMEPEVVQGLFPCVDELSDIHTRFL 495

  Fly  1636 NTEDLLENNQTLAERMRDAL------DMSLEQGDDDLLTVNIGRIFLDFTQMLHAFESYCVRQAG 1694
            |         .|.||.|.||      :..:.:..|.|::...|.   :..||...:..:|.|...
Mouse   496 N---------QLLERRRQALCPGSTRNFVIHRLGDLLISQFSGS---NAEQMRKTYSEFCSRHTK 548

  Fly  1695 ASLLLANL-EKEKELLRIFLKVSQMENAVLRRMNLNSFLMVPVQRVTKYPLLLARLYKVTPSHLE 1758
            |..|...| .::|...:...|:::  :|||:|..:...:::..||:||||:|:.|:  :..||..
Mouse   549 ALKLYKELYARDKRFQQFIRKMTR--SAVLKRHGVQECILLVTQRITKYPVLINRI--LQNSHGV 609

  Fly  1759 GRE---------LLKQAQEKIELHLNHINQEAK--DVPTKLWRRISSSSPNRRASCEIDMINIKL 1812
            ..|         |:|:....::..::.:.:||:  ::..::..|..:..|.:......:::..||
Mouse   610 EEEYQDLASALGLVKELLSNVDQDVHELEKEARLQEIYNRMDPRAQTPVPGKGPFGRDELLRRKL 674

  Fly  1813 RKMAIDVLEWNHDEVRFAMEGRLLYTQPTDSNWKKARTIKLTPVNALLVTNGKPSANYRAEKAMS 1877
                             ..||.||        ||.| |.:...|..||:|:.......:.:|.:.
Mouse   675 -----------------IHEGCLL--------WKTA-TGRFKDVLLLLMTDVLVFLQEKDQKYIF 713

  Fly  1878 EKLNFPKHTGIREASLLLVKEKC----GRYTLIREPLYLDRCVVCSEADWDDYFEVQEIS----- 1933
            ..|:.|....::.   |:|::..    |.:.:...|..:......|..|...:..|.:.|     
Mouse   714 TSLDKPSVVSLQN---LIVRDIANQAKGMFLISSGPPEMYEVHAASRDDRTTWIRVIQQSVRLCP 775

  Fly  1934 SKDTF-IFKAEDGVRTKQWYTQLQYHAQGM 1962
            |::.| :.:.||....::..|:||...|.:
Mouse   776 SREDFPLIETEDKAYLRRIKTKLQQKNQAL 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 55/214 (26%)
Arhgef2XP_006501121.1 C1 240..285 CDD:237996
RhoGEF 437..631 CDD:238091 56/209 (27%)
PH_ARHGEF2 671..786 CDD:275428 27/143 (19%)
TIGR02680 <1000..>1072 CDD:274256
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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