DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and FGD4

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_001357227.2 Gene:FGD4 / 121512 HGNCID:19125 Length:903 Species:Homo sapiens


Alignment Length:796 Identity:157/796 - (19%)
Similarity:275/796 - (34%) Gaps:224/796 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1272 ASLQRIRLERQ--PA--TPGISA--TKEEDRLSNRGSISSANSFASAHNYELFDFDGGAGGNES- 1329
            ::.:|:.:.|:  |:  .||:..  ::....|...|:.:......|           ||.|:.: 
Human     7 SNFRRVAIRRKSNPSYLPPGVPRPWSRPASHLGRVGTAAFKGQVPS-----------GATGSSTC 60

  Fly  1330 -------DCYQSCSSELTASGILEEDSVS-----PIK----DPETELDAATRAKFYQLLVDATLA 1378
                   .|..|.::.|....:.||::..     |.|    .|:.::.                 
Human    61 PKIALVPPCSTSSTTTLVGENVSEEEAQGINGNRPAKHSAASPKPQVP----------------- 108

  Fly  1379 EIEHSTHMDQTLGTDSEHHYESIRH----SGDPIYEEIHEVPPPLPLSAPPLNDAELEKKA-ARS 1438
              ....|:.   .:.|.:.:::.||    |..|..|||.      |.||..::..:..|.: ..|
Human   109 --PKPLHLQ---NSPSSNIHQTPRHKALPSAKPRMEEIK------PASASCVSKEKPSKVSDLIS 162

  Fly  1439 IFEGASKYDILSYLVDAKERG-----------------------LAREESFDYGN---------- 1470
            .|||.|.   ||...|.|:..                       |::......||          
Human   163 RFEGGSS---LSNYSDLKKESAVNLNAPRTPGRHGLTTTPQQKLLSQHLPQRQGNDTDKTQGAQT 224

  Fly  1471 ----------NPKIIEEEAADTLSDLDKRQAEERERDRD--SGQSSMSSLSP--PPHNFICGGAG 1521
                      |....|||.|.|||.....||.|...|..  :|:...::.:|  |..:...|.|.
Human   225 CVANGVMAAQNQMECEEEKAATLSSDTSIQASEPLLDTHIVNGERDETATAPASPTTDSCDGNAS 289

  Fly  1522 KSS------GSDVERQDSGVGSETSKTSRSKYQATPTVLHLCEDCDGAVEMQVGDNGILYAPLVC 1580
            .||      |..:..::.|..:||....|...: :|..|   |..|...||              
Human   290 DSSYRTPGIGPVLPLEERGAETETKVQERENGE-SPLEL---EQLDQHHEM-------------- 336

  Fly  1581 RKCGKKRVERK--EIITEIVETEEKYGRDLQIILEEFCHPMLV---AGLLTQEQLSAIFLNTEDL 1640
                |:..|:|  :|..|::.||..|...|.::.:.|...:|.   .|....|.::.||.|...:
Human   337 ----KETNEQKLHKIANELLLTERAYVNRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSI 397

  Fly  1641 LENNQTLAERMRDALDMSLEQGDDDLLTVNIGRIFLDFTQMLHAFESYCVRQAGASLLLANLEKE 1705
               |...::.:...|:..:::.:   .|..||.|.......|..:..|......|..|:.|:.:.
Human   398 ---NAFHSKFLLPELEKRMQEWE---TTPRIGDILQKLAPFLKMYGEYVKGFDNAMELVKNMTER 456

  Fly  1706 KELLRIFLKVSQMENAVLRRMNLNSFLMVPVQRVTKYPLLLA-RLYKVTPSHLEGRELLKQAQEK 1769
            ....:..::..|.:. :...:.|...::.||||:.:|.:||. .|.|:.|..|:..: .|::.|.
Human   457 IPQFKSVVEEIQKQK-ICGSLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSLDWND-AKKSLEI 519

  Fly  1770 IELHLNHINQEAKDVPTKLWRRISSSSPNRRASCEIDMINIKLRKMAIDVLEWNHDEVRFAMEGR 1834
            |....:|.|...:                       .|.|:|......::|....|.|       
Human   520 ISTAASHSNSAIR-----------------------KMENLKKLLEIYEMLGEEEDIV------- 554

  Fly  1835 LLYTQPTDSNWKKARTIKLTPVNALLVTNGKPSANYRAEKAMSEKLNF--PKHTGIREASLLLVK 1897
                .|::...|:.:.:||...|.        ||..|.....:..|.:  ||.:        ||.
Human   555 ----NPSNELIKEGQILKLAARNT--------SAQERYLFLFNNMLLYCVPKFS--------LVG 599

  Fly  1898 EKCGRYTLIREPLYLDRCVVCSEADWDDYFEVQEISSKD-TFIFKAEDGVRTKQWYTQLQYHAQG 1961
            .|   :| :|..:.:|...:. |...::|....::|.|: |...:|......::|...||   :.
Human   600 SK---FT-VRTRVGIDGMKIV-ETQNEEYPHTFQVSGKERTLELQASSAQDKEEWIKALQ---ET 656

  Fly  1962 MGAWRKR----RNALA 1973
            :.|:.:|    |||:|
Human   657 IDAFHQRHETFRNAIA 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 41/189 (22%)
FGD4NP_001357227.2 RhoGEF 344..528 CDD:238091 41/191 (21%)
PH1_FDG4 560..653 CDD:275434 23/113 (20%)
FYVE_FGD1_2_4 691..755 CDD:277280
PH2_FGD1-4 774..876 CDD:270056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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