DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF64C and akap13

DIOPT Version :9

Sequence 1:NP_001261425.1 Gene:RhoGEF64C / 38578 FlyBaseID:FBgn0035574 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_021327529.1 Gene:akap13 / 108190639 -ID:- Length:1416 Species:Danio rerio


Alignment Length:1173 Identity:226/1173 - (19%)
Similarity:403/1173 - (34%) Gaps:383/1173 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   963 THEVHRLKISHSEEDA----------DLGVELRRRPNL-------------------FLSSPGEE 998
            |.:|..:|| |.::||          .|..:..|.|..                   |||....|
Zfish    18 TVDVVLIKI-HRDKDALCSSVSQKRHSLSTDGSRYPEFQTCRSELVSFRDSGSDTDGFLSPDAGE 81

  Fly   999 DAAPKKTSILISGDDCYSTMNLSANAAQPLYQSSVVVNSHSATSVCISVSSAEEQEQ-------- 1055
            |...:|....:.|.|..|.:::|.:            ::...|||....||||..|:        
Zfish    82 DNVFRKGQGSVGGGDSTSEVSVSCS------------STDDTTSVGRPSSSAESSEESQLRGEAE 134

  Fly  1056 -----ELNQLNTLRSQQMGMGIAIIPIR-----------GASEVNLQRSVSCISSTSSSSTSSSS 1104
                 .|.:.....|.....|..:.|.|           |..|:| ||              ||.
Zfish   135 DEAKDRLTETPLPASLFRSSGRPLSPFRRHSWGPGKNQAGEEEMN-QR--------------SSV 184

  Fly  1105 SSSGRGRTLIRLDYDRERKGSATSSTPINTPPVISSTPATPPPTDLPIENANPLVPHETELLKIL 1169
            .::|.|:.:.   |.|.                :|..|:.|.|   .:|....|:.:..|     
Zfish   185 QNAGEGKPVF---YRRS----------------LSWCPSEPCP---ELEEIRKLISYSLE----- 222

  Fly  1170 RNPVEAVKLNLVPHVCGLRAPTRESGKSKKIQEEEVSGTPVKDPGFIAKLLQD-----PMLGQVA 1229
                            ||.|.. |.||..:      ||.|.||...:.:  ||     .::....
Zfish   223 ----------------GLAAGI-EDGKRWR------SGAPSKDQRGVQR--QDSEDRGSLMSLTE 262

  Fly  1230 EGLETE-----------------------TVAELIENSLQRLQQARRGIDMSGTKDHDDMNRLIS 1271
            ||.|::                       :|...:..|:..|..::|.:|..|            
Zfish   263 EGPESDLGECRSPGIQKSRKYHQFRNSSSSVTLPLTKSVSMLSISQRDLDAIG------------ 315

  Fly  1272 ASLQRIRLERQ--------PATP--------GISATKEEDRLSNRGSISSANSFASAHN--YELF 1318
                |||.:|:        |..|        ..|::.|||       |.|..||::|.|  |.:.
Zfish   316 ----RIRRKRRISFTFNLSPILPKSKSVITVSSSSSDEED-------IISMTSFSTAGNMGYSIT 369

  Fly  1319 DFDGGAGGNESDCYQSCSSELTAS-GILEEDSVSPIKDPETE------LDAATRAKFYQLLVDAT 1376
            :.:.|....:   ::..|::::.: ..|:.......::.|.|      .:|..|.|   ..|:..
Zfish   370 EEEPGPLRGD---FEKSSTKVSRTFSYLKNKMYKKAREKEKEKNREKDREAKEREK---KSVNGH 428

  Fly  1377 LAEIEHSTH------MDQTLGTDSEHHYE--SIRHSGDPIYEEIHEVPP---------------- 1417
            |....:|.|      .::||.|....|..  :||     :::...|..|                
Zfish   429 LFTAVNSLHPALCQQCNKTLNTKDAVHCTNCNIR-----VHKSCRENIPICLKSRMKQFAIPEST 488

  Fly  1418 PLPLSAPPLNDAELEKKAARSIFEGASKYDILSYLVDAKERGLAREESFDYGNNPKIIEEEAADT 1482
            .:|:.......:.|.::...:||.....    |.::.::     |..|....::..:.:..:.:.
Zfish   489 TMPVVTLRTKSSTLRERPWSAIFSPEEH----SVIIPSR-----RPTSIMPFHSSNLSKSMSINN 544

  Fly  1483 LSDLDKRQAEERERDRDSGQSSMSSLSPPPHNFICGGAGKSSGSDVERQDSGVGSETSKTSRSKY 1547
            ::..|......|   |...||: .||..|         .|.:.|: |..|.|.....|:      
Zfish   545 IAMFDDMPLSGR---RYLSQST-DSLHKP---------NKVTASN-ESLDEGTEMVDSR------ 589

  Fly  1548 QATPTVLHLCEDCDGAV-EMQVGDNGILYAPLVCRKCGKKRVERKEIITEIVETEEKYGRDLQII 1611
                    |..|.:..| |::.....::......::..|..::|:::|.|:::||..:.|.|:|:
Zfish   590 --------LMGDFEADVKELEADSWSLIVDKKYLKQLKKDIIKRQDVIYELIQTEMHHLRTLRIM 646

  Fly  1612 LEEFCHPMLVAGLLTQEQLSAIFLNTEDLLENN----QTLAERMRDA-LDMSLEQGDDDLLTVNI 1671
            .:.:...:|:...|..:.:..:|...:||||.:    ..|.||.::| ||     |.|..|...|
Zfish   647 CDVYSKGLLMDLQLEPQAVEKMFPMLDDLLELHSFFFSALLERKKEARLD-----GTDGFLIHRI 706

  Fly  1672 GRIFL------DFTQMLHAFESYCVRQAGASLLLANLEKEKELLRIFLKVSQMENAVLRRMNLNS 1730
            |.:.:      :...|...:..:|.|...|.....:|....:..:.|:: .:|.::|:||:::..
Zfish   707 GDLLVSQFSDSNAESMKRIYGKFCSRHNEAVNFYKDLHARDKRFQAFIR-KKMSSSVVRRLSIPE 770

  Fly  1731 FLMVPVQRVTKYPLLLARLYKVTPSH-------LEGRELLKQAQEKIELHLNHINQEAKDVPTKL 1788
            .:::..||:||||:||.|:.:.|..:       .:..:|||.....::..:|  ..|.|....::
Zfish   771 CILLVTQRITKYPVLLQRILQHTKENEKDFEDLTQAFQLLKDIIASVDSKVN--EHEKKKKLKEI 833

  Fly  1789 WRRISSSSPNRRASCEIDMINIKLRKMAIDVLEWNHDEVRFAMEG-----RLLYTQPTDSNWKKA 1848
            :.|..|.|..|..|.::                       ||.|.     |||:..|..   .|.
Zfish   834 YGRTDSKSITRMKSGQM-----------------------FAREDLVRGRRLLHDGPLQ---LKN 872

  Fly  1849 RTIKLTPVNALLVTNGKPSANYRAEKAMSEKLNFPKHTGIREASLLLVKEKCGRYTLIREPLYLD 1913
            ...:|..|:|||:::                            .|:.::||..:|....    ||
Zfish   873 TAGRLKDVHALLLSD----------------------------VLVFLQEKDQKYVFAS----LD 905

  Fly  1914 -RCVVCSEADWDDYFEVQEISSKDTFIFKAEDGVRTKQWYTQLQYHAQGMGAWRKRRNALANIMI 1977
             |..|.|.    ....|:|::.::..:|....|:...:   .::.||..    |:.||....|:.
Zfish   906 QRATVISL----QKLIVREVAHEERGLFLITAGIANPE---MVEVHASS----REERNTWMQIIQ 959

  Fly  1978 NGM 1980
            :.|
Zfish   960 DAM 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF64CNP_001261425.1 RhoGEF 1593..1779 CDD:279015 49/203 (24%)
akap13XP_021327529.1 C1 428..472 CDD:197519 10/48 (21%)
RhoGEF 625..818 CDD:238091 49/198 (25%)
PH_AKAP13 862..964 CDD:275427 29/147 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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