DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12493 and Adar

DIOPT Version :10

Sequence 1:NP_647927.3 Gene:CG12493 / 38575 FlyBaseID:FBgn0035571 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_006232836.1 Gene:Adar / 81635 RGDID:71099 Length:1183 Species:Rattus norvegicus


Alignment Length:335 Identity:68/335 - (20%)
Similarity:111/335 - (33%) Gaps:91/335 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DCNMPDGESSLVITDGDSMSKIPDDAAMATSDPKKKKKKVKKLKRSQKAKDRLVRPLPKAVTSKD 96
            |..:|.||..|...|||..|.:...:.:.  |..:.|:|:         .|.|..     |:...
  Rat   224 DKEVPRGEPDLDSEDGDPASDLEGPSELL--DMAEIKEKI---------CDYLFN-----VSKSS 272

  Fly    97 ALMVLK--------ELKGVIIDNMQIKQD--HEGKNVANIVVNSKKYD-AEGSSENSAGNAACEK 150
            ||.:.|        ::..|:|| ::.:.|  .||.......:..||.: .:......:|.||...
  Rat   273 ALNLAKNIGLAKARDVNAVLID-LERQGDVYREGATPPIWYLTDKKRERLQMKRSTHSGPAATPA 336

  Fly   151 ALREILTTKMKALLAEPENSSGGDE-------DNILEKMTSY----------------------- 185
            |:.| .|.........|..|.|...       :|..|.:|.|                       
  Rat   337 AVSE-ATQSTSFPTCHPPQSGGSSSMATSKRVENGQEPVTKYESRHEARPGPVRLRPHAYHNGPS 400

  Fly   186 -AVYKLAEK--WNSDAIDVAALYNDVKNKKTS-SSVGQLPKL----------WKNMHPCMV---- 232
             |.|..:|.  |.:|  |:....|.:...... .::.::|..          :|.:..|.:    
  Rat   401 RAGYVASENGPWATD--DIPDNLNSIHTAPGEFRAIMEMPSFYSPTLPRCSPYKKLTECQLKNPV 463

  Fly   233 -----LMQMRPQT-TFKFLGSSGENRKV-FSMGVSVDNCEF-KADGPTKK----DARRKVAALVC 285
                 ..|...|| .|..:..||.:.:. |...|.::..|| .|:..:||    ||..|..|::.
  Rat   464 SGLLEYAQFTSQTCDFNLIEQSGPSHEPRFKFQVVINGREFPPAEAGSKKVAKQDAAVKAMAILL 528

  Fly   286 NKLFGTDYPQ 295
            .:....|..|
  Rat   529 REAKAKDSGQ 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12493NP_647927.3 DSRM_SF 95..155 CDD:444671 15/70 (21%)
DSRM_SF 227..284 CDD:444671 18/72 (25%)
AdarXP_006232836.1 z-alpha 145..211 CDD:280459
z-alpha 253..317 CDD:295419 15/78 (19%)
DSRM_DRADA_rpt1 460..530 CDD:380742 17/69 (25%)
DSRM_SF 571..641 CDD:444671
DSRM_DRADA_rpt3 679..749 CDD:380744
ADEAMc 793..1176 CDD:214718
Blue background indicates that the domain is not in the aligned region.

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