DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12493 and adarb1a

DIOPT Version :10

Sequence 1:NP_647927.3 Gene:CG12493 / 38575 FlyBaseID:FBgn0035571 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_571685.2 Gene:adarb1a / 58134 ZFINID:ZDB-GENE-000627-2 Length:720 Species:Danio rerio


Alignment Length:326 Identity:76/326 - (23%)
Similarity:126/326 - (38%) Gaps:73/326 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DQEDAGMSDDLKETAMDCNMPDGESSLVITDGDSMSKIPDDAAMATSDPKKKKKKVKKLKRSQKA 80
            |:..:..|.|:||..   |:.:..|..|:.:|..::   :.:|...| .|:..::..|.....|.
Zfish    24 DKHLSTCSMDVKENR---NLDNLSSKEVLGEGPHLA---NGSARGLS-RKRPLEEGNKGHGHSKF 81

  Fly    81 KDRLVRPLPKAVTSKDALMVLKELKGVIIDNMQIK------QDHEGKNVANIVVNSKKYDAEGSS 139
            :.:..|.....:..|:|||.|.|:|    ..:|.|      ..|....|..:.||.:.::..|.:
Zfish    82 RPKKRRKPQGPILPKNALMQLNEIK----PGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPT 142

  Fly   140 ENSAGNAACEKALREILTTKMKALLAEPENSSGGDEDNILEKMTSYAVYKLAEKWNSDAIDVA-A 203
            :..|...|.|||||..:         :..|:|   |.::....|    ..:...:.||..|.. .
Zfish   143 KKKAKLNAAEKALRSFV---------QFPNAS---EAHLAMGRT----LTVNADFTSDQADFPDM 191

  Fly   204 LYNDVKNK--------KTSSSVGQLPKL----------WKNM-HP-------------------C 230
            |:|..:..        .:..|.|.|..|          :||. ||                   .
Zfish   192 LFNGFETPVPPDDPFYLSLGSNGSLCSLKEYRLPVTLKYKNRPHPPLPLAPALTAPPTGSGKNAV 256

  Fly   231 MVLMQMRPQTTFKFLGSSGENR-KVFSMGVSVDNCEFKADGPTKKDARRKVAALVCNKLFGTDYP 294
            |:|.::||...::|:..|||:. |.|.|.|:||..:|:..|..||.|:.:.|....:.||.....
Zfish   257 MILNELRPGLKYEFVAESGESHAKNFIMSVTVDTQKFQGSGRNKKLAKARAAQAALSGLFNMQLD 321

  Fly   295 Q 295
            |
Zfish   322 Q 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12493NP_647927.3 DSRM_SF 95..155 CDD:444671 21/65 (32%)
DSRM_SF 227..284 CDD:444671 22/77 (29%)
adarb1aNP_571685.2 DSRM_RED1_rpt1 91..162 CDD:380724 21/83 (25%)
DSRM_RED1_rpt2 251..320 CDD:380727 22/68 (32%)
ADEAMc 341..717 CDD:214718
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.