DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12493 and adarb1b

DIOPT Version :10

Sequence 1:NP_647927.3 Gene:CG12493 / 38575 FlyBaseID:FBgn0035571 Length:296 Species:Drosophila melanogaster
Sequence 2:XP_021334693.1 Gene:adarb1b / 558759 ZFINID:ZDB-GENE-030219-15 Length:750 Species:Danio rerio


Alignment Length:324 Identity:78/324 - (24%)
Similarity:124/324 - (38%) Gaps:87/324 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NVSDQEDAGMSDDLKETAMDCNMPDGESSLVITDGDSMSKIPDDAAMATSDPKKKKKKVKKLKRS 77
            |||.:|.||:.:.|         |:|      :.|....:..::.....|..|.:.||.||    
Zfish    75 NVSSKEGAGLVEQL---------PNG------SGGGGRKRPLEEGNNGHSHSKFRPKKRKK---- 120

  Fly    78 QKAKDRLVRPLPKAVTSKDALMVLKELKGVIIDNMQIK------QDHEGKNVANIVVNSKKYDAE 136
                      .|..|..|:|||.|.|:|    ..:|.|      ..|....|..:.||.:.::..
Zfish   121 ----------TPGPVLPKNALMQLNEIK----PGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGS 171

  Fly   137 GSSENSAGNAACEKALREIL--TTKMKALL------------------------------AEPEN 169
            |.::..|...|.|||||..:  ....:|.|                              |.||.
Zfish   172 GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEE 236

  Fly   170 S--SGGDEDNILEKMTSYAVYKLAEKWNSDAIDVAALYNDVKNKKTSSSVGQLPKLWKNMHPCMV 232
            :  .|.:.:..|..:..|.|.:.|   .::::..|.|  ...:...||:.|:        :|.|:
Zfish   237 TFFLGSNGNGSLNPLGEYPVPQAA---GTNSLVQAPL--PPPSSFASSASGK--------NPVMI 288

  Fly   233 LMQMRPQTTFKFLGSSGENR-KVFSMGVSVDNCEFKADGPTKKDARRKVAALVCNKLFGTDYPQ 295
            |.::||...::|:..|||:. |.|.|.|:||:..|:..|..||.|:.:.|....:.||.....|
Zfish   289 LNELRPGLKYEFVSESGESHAKNFVMSVTVDSQMFEGSGRNKKLAKARAAQAALSSLFNMQLDQ 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12493NP_647927.3 DSRM_SF 95..155 CDD:444671 21/65 (32%)
DSRM_SF 227..284 CDD:444671 21/57 (37%)
adarb1bXP_021334693.1 DSRM_RED1_rpt1 123..194 CDD:380724 22/74 (30%)
DSRM_RED1_rpt2 282..350 CDD:380727 24/75 (32%)
ADEAMc 371..747 CDD:214718
Blue background indicates that the domain is not in the aligned region.

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