Protein Alignment CG12493 and stau2

DIOPT Version :10

• Sequence 1: NP_647927.3
• Gene: CG12493 / 38575
• FlyBaseID: FBgn0035571
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: XP_021325790.1
• Gene: stau2 / 393899
• ZFINID: ZDB-GENE-040426-687
• Length: 684
• Species: Danio rerio
• Alignment Length: 278
• Identity: 55/278 - (19%)
• Similarity: 95/278 - (34%)
• Gaps: 75/278 - (26%)

  Fly    29 TAMDCNMPDGESSLVITDGDSMSKIPDDAAMATSDPKKKKKK--VKKLKRSQKAKDRLVRPLPKA 91
            |...|  |...|..|.:...:....|....||  :||:|...  |.:|.|..:     ::|..|.
Zfish    45 TTPTC--PSPASGFVDSTVPASPSGPPQENMA--NPKEKTPMCLVNELARFNR-----IQPQYKL 100

  Fly    92 VTSKDALMVLKELKGVIIDNMQIKQDHEGKNVANIVVNSKKYDAEGSSENSAGNAACEKALREIL 156
            :..|...                   |.......:.:.::.:::||||...|.::...|||.|
Zfish   101 LNEKGPA-------------------HAKIFTVQLCLGNQVWESEGSSIKKAQHSTATKALAE-- 144

  Fly   157 TTKMKALLAEPENSSGGDEDNILEKMTSYAVYKLAEKWNSDAIDVAALYNDVKNKKTSSSVGQLP 221
                .:|...|..|...|.::                 |..:|......|.:..|:     |: |
Zfish   145 ----SSLPRPPPRSPKADSNS-----------------NPGSITPTVELNGLAMKR-----GE-P 182

  Fly   222 KLWKNMHPCMVLMQMRP----QTTFKFLGSSGEN-----RKVFSMGVSVDNCEFKADGPTKKDAR 277
            .:::.:.|       :|    :..:.|.|...:.     .|||.:.::|.|.||..:|.|::.||
Zfish   183 AIYRPLDP-------KPIPNYRANYNFRGMFNQRYHYPVPKVFYVQLTVGNNEFIGEGRTRQAAR 240

  Fly   278 RKVAALVCNKLFGTDYPQ 295
            ...|......|.....|:
Zfish   241 HNAAMKALQALKNEPIPE 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12493	NP_647927.3	DSRM_SF	95..155	CDD:444671	10/59 (17%)
		DSRM_SF	227..284	CDD:444671	16/65 (25%)
stau2	XP_021325790.1	DSRM_STAU2_rpt1	75..142	CDD:380709	16/90 (18%)
		DSRM_STAU2_rpt2	170..251	CDD:380711	20/93 (22%)
		DSRM_STAU2_rpt3	278..344	CDD:380713
		DSRM_STAU2_rpt4	376..461	CDD:380715
		Staufen_C	526..631	CDD:465131