DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12493 and Adar

DIOPT Version :10

Sequence 1:NP_647927.3 Gene:CG12493 / 38575 FlyBaseID:FBgn0035571 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001368969.1 Gene:Adar / 31130 FlyBaseID:FBgn0026086 Length:681 Species:Drosophila melanogaster


Alignment Length:262 Identity:66/262 - (25%)
Similarity:103/262 - (39%) Gaps:59/262 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DCNMPDGESSLVITDGDSMSKIPDDAAMATSDPKKKKKKVKKLKRSQKAKDRLVRPLPKAVTSKD 96
            |.||......|....|..|.|.        ||||||           ..|:|:.:|       |:
  Fly    68 DINMNGYNRKLPQKRGYEMPKY--------SDPKKK-----------MCKERIPQP-------KN 106

  Fly    97 ALMVLKELKGVIIDNMQIKQD--HEGKNVANIVVNSKKYDAEGSSENSAGNAACEKALREILTTK 159
            .:.:|.||:..:|..::.:..  |......::.|:.:||..:|.|:..|...|...|||..:..|
  Fly   107 TVAMLNELRHGLIYKLESQTGPVHAPLFTISVEVDGQKYLGQGRSKKVARIEAAATALRSFIQFK 171

  Fly   160 MKALLAEPENSSGGDEDNILEKMTSYAVYKLAEKWNSDAIDVAALYNDVKNKKTSSSVGQLPKLW 224
            ..|:|: |...:|                      |.|......|.||| :|...:..||  |..
  Fly   172 DGAVLS-PLKPAG----------------------NLDFTSDEHLENDV-SKSAITVDGQ--KKV 210

  Fly   225 KNMHPCMVLMQMRPQTTFKFLGSSG-ENRKVFSMGVSVDNCEFKADGPTKKDARRKVA----ALV 284
            .:..|.|:|.::.....|:.:...| :|...|.|.|:::..:|...||:||.|:...|    |.:
  Fly   211 PDKGPVMLLYELFNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKTAKNAAAKAALASL 275

  Fly   285 CN 286
            ||
  Fly   276 CN 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12493NP_647927.3 DSRM_SF 95..155 CDD:444671 16/61 (26%)
DSRM_SF 227..284 CDD:444671 17/61 (28%)
AdarNP_001368969.1 DSRM_STRBP_RED-like_rpt1 105..167 CDD:380694 16/61 (26%)
DSRM_SF 213..>259 CDD:444671 11/45 (24%)
ADEAMc 306..677 CDD:214718
Blue background indicates that the domain is not in the aligned region.

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