DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12493 and STAU2

DIOPT Version :10

Sequence 1:NP_647927.3 Gene:CG12493 / 38575 FlyBaseID:FBgn0035571 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001157852.1 Gene:STAU2 / 27067 HGNCID:11371 Length:570 Species:Homo sapiens


Alignment Length:337 Identity:64/337 - (18%)
Similarity:103/337 - (30%) Gaps:123/337 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TDGDSMSK----IPDDAAMATSDPKKKKKKVKK-------------------LKRSQKAKDRLVR 86
            ::|.|:.|    :.:.|...::.||..:|..|.                   :||.:.|   :.|
Human    53 SEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPA---IYR 114

  Fly    87 PL-PKAVTSKDALMVLKELKGVIIDNMQIKQDHEGKN------------VANIVVNSKKYDAEGS 138
            || ||.                 ..|.:...:..|..            ...:.|.:.::..||.
Human   115 PLDPKP-----------------FPNYRANYNFRGMYNQRYHCPVPKIFYVQLTVGNNEFFGEGK 162

  Fly   139 SENSAGNAACEKALREILTTKMKALLAEPENSSGG---DEDNILEKMTSYAVYKLAEKWNSDAID 200
            :..:|.:.|..|||:.:....:..  ..|:|...|   |:|....|.....|:::|.|.|. .:.
Human   163 TRQAARHNAAMKALQALQNEPIPE--RSPQNGESGKDVDDDKDANKSEISLVFEIALKRNM-PVS 224

  Fly   201 VAALYND----VKNKKTSSSVGQL--------PKLWKNMHPCMVLMQM----------------- 236
            ...:...    :|:..|..|||:.        .||.|......||.::                 
Human   225 FEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFK 289

  Fly   237 -RPQTTFK------------------------------FLGSSG-ENRKVFSMGVSVDNCEFKAD 269
             ||:|..|                              .|...| ..|:.|.|.|.|.|......
Human   290 KRPKTIVKAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGT 354

  Fly   270 GPTKKDARRKVA 281
            ||.||.|::..|
Human   355 GPNKKIAKKNAA 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12493NP_647927.3 DSRM_SF 95..155 CDD:444671 10/71 (14%)
DSRM_SF 227..284 CDD:444671 20/104 (19%)
STAU2NP_001157852.1 DSRM_SF 3..70 CDD:444671 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..94 4/22 (18%)
DSRM_STAU2_rpt2 98..179 CDD:380711 18/100 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..203 5/23 (22%)
DSRM_STAU2_rpt3 206..272 CDD:380713 15/66 (23%)
Nuclear localization signal 1. /evidence=ECO:0000250 273..291 0/17 (0%)
DSRM_STAU2_rpt4 304..389 CDD:380715 14/63 (22%)
Nuclear localization signal 2. /evidence=ECO:0000250 373..412
Required for dendritic transport. /evidence=ECO:0000250 381..570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..409
Staufen_C 461..523 CDD:465131
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..570
Blue background indicates that the domain is not in the aligned region.

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