DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13712 and halo

DIOPT Version :10

Sequence 1:NP_647926.1 Gene:CG13712 / 38574 FlyBaseID:FBgn0035570 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_001137765.1 Gene:halo / 33334 FlyBaseID:FBgn0001174 Length:109 Species:Drosophila melanogaster


Alignment Length:98 Identity:28/98 - (28%)
Similarity:51/98 - (52%) Gaps:23/98 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SVSYALYLHRRELGRPRRKMMRIASTKLQLTNELI--QLQQRRQWESAFELEFDAEASSQQMSAL 82
            |:.|.|:.:|.||.|.....|::::.||.||:.||  .::..||:::.            ::..|
  Fly    18 SLHYTLFAYREELRRRDAPFMKMSTIKLHLTDNLILQTIKNIRQYDTI------------EIMNL 70

  Fly    83 DREREYRDRLRTNMQRQLEKQQKRKRKYLEEIG 115
            ::|        .|.:|:|.||.::.|| ||::|
  Fly    71 NQE--------INFKRRLTKQMRKVRK-LEKLG 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13712NP_647926.1 DUF733 20..109 CDD:428418 23/90 (26%)
haloNP_001137765.1 DUF733 17..100 CDD:428418 28/98 (29%)

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