DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and AT4G03115

DIOPT Version :9

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001329297.1 Gene:AT4G03115 / 828074 AraportID:AT4G03115 Length:346 Species:Arabidopsis thaliana


Alignment Length:324 Identity:97/324 - (29%)
Similarity:155/324 - (47%) Gaps:47/324 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVYGVEKKTVPTHM---------KFVMGGTSGMLATCIVQPLDLLKTRMQIS---------GTLG 49
            :|.|.|:...|.::         .|.:.|.|..|||.:..|||::|.|:|:.         |..|
plant    46 VVEGNEELRKPQNLIPPFSKVVSHFGISGISVALATGVTHPLDVVKVRLQMQHVGQRGPLIGMTG 110

  Fly    50 TREYKNSFEVLSKVLKNEGILSLYNGLSAGLLRQATYTSAKMGVYQ---MELDWYRKNFGNYPSM 111
                     :..:::||||..|||.||:..|.|...|...::|:|:   :..||   .||: .::
plant   111 ---------IFLQLMKNEGRRSLYLGLTPALTRSVLYGGLRLGLYEPTKVSFDW---AFGS-TNV 162

  Fly   112 VASMTMGIVAGAFGAMCGNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVR-IVKDEGVVALWRG 175
            :..:..|..||||.....||.||..:|:..:...:|          .|.|| ||..||:.|||:|
plant   163 LVKIASGAFAGAFSTALTNPVEVVKVRLQMNPNAVP----------IAEVREIVSKEGIGALWKG 217

  Fly   176 CLPTVGRAMVVNMVQLASYSLMKNQL--HGYLSEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQ 238
            ..|.:.||..:...|||:|...|..|  ...|.||..|||.:::|:||::::.:.|:||.|||:.
plant   218 VGPAMVRAAALTASQLATYDEAKRILVKRTSLEEGFHLHLCSSVVAGLVSTLITAPMDMIKTRLM 282

  Fly   239 QMKVIDGKPEYSGTIDVLKKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHML 302
            ..:..:....|........||::.||..|::||......|:||.|:.:|:..|::......|.:
plant   283 LQQGSESTKTYRNGFHCGYKVVRKEGPLALYKGGFAIFARLGPQTMITFILCEKLRSLAGLHTM 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:278578 33/118 (28%)
PTZ00169 18..296 CDD:240302 92/292 (32%)
Mito_carr 109..205 CDD:278578 31/98 (32%)
Mito_carr 208..300 CDD:278578 27/91 (30%)
AT4G03115NP_001329297.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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