DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18418 and ucp2

DIOPT Version :9

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_571251.1 Gene:ucp2 / 555812 ZFINID:ZDB-GENE-990708-8 Length:310 Species:Danio rerio


Alignment Length:291 Identity:87/291 - (29%)
Similarity:148/291 - (50%) Gaps:17/291 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MKFVMGGTSGMLATCIVQPLDLLKTRMQISGT--------LGTREYKNSFEVLSKVLKNEGILSL 72
            :||:..||:..:|.....|||..|.|:||.|.        .|..:|:..|..:|.:::.||..||
Zfish    15 VKFIGAGTAACIADLFTFPLDTAKVRLQIQGENKASTNMGRGPVKYRGVFGTISTMVRVEGPRSL 79

  Fly    73 YNGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIVAGAFGAMCGNPAEVALI 137
            |:||.|||.||.::.|.::|:|.....:|.|. .::..:.:.:..|...||.......|.:|..:
Zfish    80 YSGLVAGLQRQMSFASVRIGLYDSVKQFYTKG-SDHAGIGSRLMAGCTTGAMAVAVAQPTDVVKV 143

  Fly   138 RMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMKNQL- 201
            |..:  ::.....:.|.:..||:..|.|:||...||:|..|.:.|..:||..:|.:|.|:|:.| 
Zfish   144 RFQA--QVSAGSSKRYHSTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDALL 206

  Fly   202 -HGYLSEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKKVLKNEGA 265
             ...:::.:|.|.|:|..:|..|::.:.|:|:.|||...    ..:.:||..::....:|..||.
Zfish   207 KSSLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMN----SAQGQYSSALNCAVAMLTKEGP 267

  Fly   266 FAVWKGFTPYLMRMGPHTIFSFVFLEQMNKA 296
            .|.:|||.|..:|:|...:..||..||:.:|
Zfish   268 KAFYKGFMPSFLRLGSWNVVMFVTYEQLKRA 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:278578 34/99 (34%)
PTZ00169 18..296 CDD:240302 85/287 (30%)
Mito_carr 109..205 CDD:278578 25/97 (26%)
Mito_carr 208..300 CDD:278578 28/89 (31%)
ucp2NP_571251.1 Mito_carr 10..112 CDD:278578 34/97 (35%)
Solcar 1 11..107 32/91 (35%)
PTZ00169 17..300 CDD:240302 86/289 (30%)
Mito_carr 113..209 CDD:278578 25/97 (26%)
Solcar 2 115..204 24/90 (27%)
Solcar 3 213..298 27/88 (31%)
Mito_carr 218..300 CDD:278578 27/85 (32%)
Purine nucleotide binding. /evidence=ECO:0000250 277..299 7/22 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.