DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and CG5805

DIOPT Version :10

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_651284.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster


Alignment Length:301 Identity:62/301 - (20%)
Similarity:119/301 - (39%) Gaps:59/301 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FVMGGTSGMLATCIVQPLDLLKTRMQISGTLGTREYKNSFEVLSKVLKNEGILSLYNGL---SAG 79
            |.:...|.....|.:.||.::||::|:...  :..||...:...|:.::||:..||.|.   |..
  Fly    43 FPLSMLSSFSVRCCLFPLTVIKTQLQVQHK--SDVYKGMVDCAMKIYRSEGVPGLYRGFWISSVQ 105

  Fly    80 LLRQATYTSAKMGVYQMELD---WYRKNF---GNYPSMVA-------------SMTMGIVAGAFG 125
            ::....|.|...||..:..|   .:|...   |...|:|.             :|.:|:.|.|  
  Fly   106 IVSGVFYISTYEGVRHVLNDLGAGHRMKALAGGGCASLVGQTIIVPFDVISQHAMVLGMSAHA-- 168

  Fly   126 AMCGNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQ 190
               |:..::..:.:.|    .|...|.:.:: |....|::.:|....:||...::...:..:.:.
  Fly   169 ---GSKGDINPLGIKS----WPGRSRLHISM-DIGREIMRRDGFRGFYRGYTASLMAYVPNSAMW 225

  Fly   191 LASYSLMKNQLHGYLSEGIPLHL----TAALVSGLLTSVTSMPLDMAKTRIQ-----QMKVIDGK 246
            .|.|.|.:::|.......:. ||    .|..:.|..|::.:.|||:.:.|:|     .|.|    
  Fly   226 WAFYHLYQDELFRICPVWVS-HLFIQCVAGSLGGFTTTILTNPLDIVRARLQVHRLDSMSV---- 285

  Fly   247 PEYSGTIDVLKKVLKNEGAFAVWKGFTPYLMRMGPHTIFSF 287
                    ..:::.:.|.....:||.:..|::   ...|||
  Fly   286 --------AFRELWQEEKLNCFFKGLSARLVQ---SAAFSF 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 24/98 (24%)
Mito_carr 109..205 CDD:395101 19/108 (18%)
Mito_carr 208..300 CDD:395101 19/89 (21%)
CG5805NP_651284.1 Mito_carr 46..125 CDD:395101 20/80 (25%)
Mito_carr 132..238 CDD:395101 20/115 (17%)
Mito_carr 245..327 CDD:395101 19/87 (22%)

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