DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and GC2

DIOPT Version :10

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster


Alignment Length:296 Identity:80/296 - (27%)
Similarity:136/296 - (45%) Gaps:36/296 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KFVMGGTSGMLATCIVQPLDLLKTRM--QISGTLGTREYKNSFEVLSKVLKNEGILSLYNGLSAG 79
            |.:.||.:|::....|.|||::|||:  |..|..|.|.|.:..:...|.:.:||...:|.|.:..
  Fly    23 KIINGGVAGIIGVACVYPLDMVKTRLQNQTIGPNGERMYTSIADCFRKTIASEGYFGMYRGSAVN 87

  Fly    80 LLRQATYTSAKMGVYQMELDWYRKNF----GNYPSMVASMTMGIVAGAFGAMCGNPAEVALIRMM 140
            ::......:.|:...    |::|.:.    |..|...|::..|: ||.|..:...|.|:..|:|.
  Fly    88 IVLITPEKAIKLTAN----DFFR
YHLASDDGVIPLSRATLAGGL-AGLFQIVVTTPMELLKIQMQ 147

  Fly   141 SDNRLMPEDR---RNYKNVGDAFV--RIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMK-- 198
            ...|:...||   |..|.:....:  .::::.|:..|::|...|..|.:..:||.   :.||.  
  Fly   148 DAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGATGVRDITFSMVY---FPLMAWI 209

  Fly   199 NQLHGYLSEG-----IPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKK 258
            |......|:|     ....|.|.|:||:.::....|.|:.|||:|    .||:.::.|.:|.:.:
  Fly   210 NDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ----ADGEKKFKGIMDCVNR 270

  Fly   259 VLKNEGAFAVWKGFTPYLMRMGPHTIFS----FVFL 290
            .||.||..|.:||....:|.:.|  :|.    |.||
  Fly   271 TLKEEGISAFFKGGLCRIMVLAP--LFGIAQMFYFL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 25/96 (26%)
Mito_carr 109..205 CDD:395101 25/102 (25%)
Mito_carr 208..300 CDD:395101 29/92 (32%)
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 23/86 (27%)
Mito_carr 123..203 CDD:395101 20/83 (24%)
Mito_carr 228..302 CDD:395101 25/79 (32%)

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