Protein Alignment CG18418 and Shawn

DIOPT Version :9

• Sequence 1: NP_647924.2
• Gene: CG18418 / 38572
• FlyBaseID: FBgn0035568
• Length: 311
• Species: Drosophila melanogaster
• Sequence 2: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 72/343 - (20%)
• Similarity: 133/343 - (38%)
• Gaps: 81/343 - (23%)

  Fly    23 TSGMLATCIVQPLDLLKTRMQ--------------ISGTLG-----------------TREYKNS 56
            |..|:..|.:.|||::|||:|              .:|.:.                 ...:..:
  Fly    48 TGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGT 112

  Fly    57 FEVLSKVLKNEGILSLYNGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNY-------PSMVA- 113
            .:...|:.:.|||.||::|||..|:.....|.    :|.:..:.::..|.:.       |..:|
  Fly   113 IDAFIKISRTEGIGSLWSGLSPTLISALPSTI----IYFVAYEQFKARFTDIHYKYTRRPDTIAH 173

  Fly   114 ------SMTMGIVAGAFGAM----CGNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEG 168
                  ...:.::||..|.:    |.:|.|:...:|.|       .|..:..:.....::|:.:|
  Fly   174 DIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQS-------QRMTHAEMFGTIRQVVQSQG 231

  Fly   169 VVALWRGCLPTVGRAMVVNMVQLASYSLMKNQLHGYLSEGIPLHLTAALVSGLLTSVTSMPLDMA 233
            |:.||||..||:.|.:..:.:....|..:|:.. |.:.........|..:||.:.:..:.|.|:.
  Fly   232 VLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF-GVVEPTFSFSFAAGAISGSVAATITTPFDVV 295

  Fly   234 KTRIQ-----QMKVIDGKPEYSGTIDV---LKKVLKNEGAFAVWKGFTPYLMRMGPH---TIFSF 287
            ||..|     :....|..|:...|..|   |..:.:..|..|::.|..|.|.::.|.   .|.||
  Fly   296 KTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAPACAIMISSF 360

  Fly   288 VF---------LEQMNKA 296
            .:         ::|.|::
  Fly   361 EYGKSFFYHYNIDQHNRS 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18418	NP_647924.2	Mito_carr	10..108	CDD:278578	24/115 (21%)
		PTZ00169	18..296	CDD:240302	72/341 (21%)
		Mito_carr	109..205	CDD:278578	24/106 (23%)
		Mito_carr	208..300	CDD:278578	24/109 (22%)
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:278578	24/114 (21%)
		Mito_carr	178..265	CDD:278578	21/94 (22%)
		Mito_carr	268..371	CDD:278578	22/102 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441480
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840