DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and Mpcp1

DIOPT Version :9

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001286628.1 Gene:Mpcp1 / 37297 FlyBaseID:FBgn0034497 Length:374 Species:Drosophila melanogaster


Alignment Length:285 Identity:61/285 - (21%)
Similarity:119/285 - (41%) Gaps:42/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FVMGGTSGMLATC-----IVQPLDLLKTRMQISGTLGTREYKNSFEVLSKVLKNEGILSLYNGLS 77
            |::.|..|:: :|     :|.||||:|.|:|:.    ..:||:.|......|..||:..|..|.:
  Fly    75 FLLCGLGGII-SCGSTHTMVVPLDLVKCRLQVD----PAKYKSVFTGFRISLAEEGVRGLAKGWA 134

  Fly    78 AGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIVAGA----FGAMCGNPAEVALIR 138
            ...:..:.....|.|:|::....|....|...:.:....:.:.|.|    |..:...|.|.|.::
  Fly   135 PTFIGYSMQGLCKFGLYEVFKKVYGDAIGEENAFLYRTGLYLAASASAEFFADIALAPMEAAKVK 199

  Fly   139 MMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMKNQLHG 203
            :.:.....       |.:.:|..::...|||.|.::|.:|...|.:...|::.|.:......|:.
  Fly   200 IQTTPGFA-------KTLREALPKMTAQEGVTAFYKGLVPLWMRQIPYTMMKFACFERTLELLYK 257

  Fly   204 YL----------SEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKK 258
            |:          .|.:.:...|..::|:..::.|.|.|...:::.|.|       .:..:||.|:
  Fly   258 YVVPKPRADCTKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQAK-------GASALDVAKQ 315

  Fly   259 VLKNEGAFAVWKGFTPYLMRMGPHT 283
            :    |...:|.|..|.::.:|..|
  Fly   316 L----GWSGLWGGLVPRIVMIGTLT 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:278578 25/94 (27%)
PTZ00169 18..296 CDD:240302 61/285 (21%)
Mito_carr 109..205 CDD:278578 18/99 (18%)
Mito_carr 208..300 CDD:278578 16/76 (21%)
Mpcp1NP_001286628.1 Mito_carr 71..160 CDD:278578 24/89 (27%)
Mito_carr <188..258 CDD:278578 15/76 (20%)
Mito_carr 273..350 CDD:278578 16/75 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441818
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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