DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and Mpcp1

DIOPT Version :10

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_611468.1 Gene:Mpcp1 / 37297 FlyBaseID:FBgn0034497 Length:374 Species:Drosophila melanogaster


Alignment Length:285 Identity:61/285 - (21%)
Similarity:119/285 - (41%) Gaps:42/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FVMGGTSGMLATC-----IVQPLDLLKTRMQISGTLGTREYKNSFEVLSKVLKNEGILSLYNGLS 77
            |::.|..|:: :|     :|.||||:|.|:|:.    ..:||:.|......|..||:..|..|.:
  Fly    75 FLLCGLGGII-SCGSTHTMVVPLDLVKCRLQVD----PAKYKSVFTGFRISLAEEGVRGLAKGWA 134

  Fly    78 AGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIVAGA----FGAMCGNPAEVALIR 138
            ...:..:.....|.|:|::....|....|...:.:....:.:.|.|    |..:...|.|.|.::
  Fly   135 PTFIGYSMQGLCKFGLYEVFKKVYGD
AIGEENAFLYRTGLYLAASASAEFFADIALAPMEAAKVK 199

  Fly   139 MMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMKNQLHG 203
            :.:.....       |.:.:|..::...|||.|.::|.:|...|.:...|::.|.:......|:.
  Fly   200 IQTTPGFA-------KTLREALPKMTAQEGVTAFYKGLVPLWMRQIPYTMMKFACFERTLELLYK 257

  Fly   204 YL----------SEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKK 258
            |:          .|.:.:...|..::|:..::.|.|.|...:::.|.|       .:..:||.|:
  Fly   258 Y
VVPKPRADCTKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQAK-------GASALDVAKQ 315

  Fly   259 VLKNEGAFAVWKGFTPYLMRMGPHT 283
            :    |...:|.|..|.::.:|..|
  Fly   316 L----GWSGLWGGLVPRIVMIGTLT 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 25/94 (27%)
Mito_carr 109..205 CDD:395101 18/99 (18%)
Mito_carr 208..300 CDD:395101 16/76 (21%)
Mpcp1NP_611468.1 Mito_carr 71..160 CDD:395101 24/89 (27%)
Mito_carr <188..258 CDD:395101 15/76 (20%)
Mito_carr 273..350 CDD:395101 16/75 (21%)

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