DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and colt

DIOPT Version :9

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:305 Identity:74/305 - (24%)
Similarity:133/305 - (43%) Gaps:28/305 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EKKTVPTHMKFVMGGTSGMLATCIVQPLDLLKTRMQISGTLGTRE---YKNSFEVLSKVLKNEGI 69
            |:|..|. ..|:.||..|:.......|||.:|.|:|........|   |:.:|:..:|.:||||:
  Fly    10 ERKANPV-KSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGV 73

  Fly    70 LSLYNGLSAGLLRQATYTSAKMGVYQMELDWYRKNFG---NYPSMVASMTMGIVAGAFGAMCGNP 131
            ..||.|:||.|...|...:.....|.:.....::...   .||.:..:   |..:|.|..:...|
  Fly    74 RGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVA---GSFSGLFSTLIMAP 135

  Fly   132 AEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSL 196
            .|  .|:::...:......|.|..:.|...::.|:.|:.::::|...|:.|.:..|.:....|..
  Fly   136 GE--RIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLVYEA 198

  Fly   197 MKNQLH-----GYLSEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYS---GTI 253
            :::...     |.:|....:.  |..|:|:...:..||.|:.|:|:|      ..||.:   |..
  Fly   199 LQDVAKSKSETGQISTASTIF--AGGVAGMAYWILGMPADVLKSRLQ------SAPEGTYKHGIR 255

  Fly   254 DVLKKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYS 298
            .|.|.::..:|..|:::|.||.::|..|.....|..:|..||.::
  Fly   256 SVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFN 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:278578 28/103 (27%)
PTZ00169 18..296 CDD:240302 70/291 (24%)
Mito_carr 109..205 CDD:278578 18/100 (18%)
Mito_carr 208..300 CDD:278578 25/94 (27%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 28/95 (29%)
Mito_carr 112..202 CDD:395101 18/94 (19%)
Mito_carr 210..299 CDD:395101 27/96 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441741
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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