DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and Ucp1

DIOPT Version :10

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_036814.1 Gene:Ucp1 / 24860 RGDID:3931 Length:307 Species:Rattus norvegicus


Alignment Length:304 Identity:94/304 - (30%)
Similarity:149/304 - (49%) Gaps:13/304 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVYGVEKKTVPT-HMKFVMGGTSGMLATCIVQPLDLLKTRMQISG---TLGTREYKNSFEVLSKV 63
            :|.....:..|| .:|....|.|..||..|..|||..|.|:||.|   ...|..||.....::.:
  Rat     1 MVSSTTSEVQPTMGVKIFSAGVSACLADIITFPLDTAKVRLQIQGEGQASSTIRYKGVLGTITTL 65

  Fly    64 LKNEGILSLYNGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIVAGAFGAMC 128
            .|.||:..||:||.||:.||.::.|.::|:|....:::........|:.:.::.|::.|......
  Rat    66 AKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGRETPASLGSKISAGLMTGGVAVFI 130

  Fly   129 GNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLAS 193
            |.|.||..:||.:.:.|.....| |....:|:..|...|.:..||:|..|.:.|.:::|..:|.:
  Rat   131 GQPTEVVKVRMQAQSHLHGIKPR-YTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVT 194

  Fly   194 YSLMKNQL--HGYLSEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKP-EYSGTIDV 255
            |.|||..|  |..|::.:|.||.:|||:|..|::.:.|:|:.|||.     |:..| :|......
  Rat   195 YDLMKGALVNHHILADDVPCHLLSALVAGFCTTLLASPVDVVKTRF-----INSLPGQYPSVPSC 254

  Fly   256 LKKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSK 299
            ...:...||..|.:|||.|..:|:|...:..||..||:.|...|
  Rat   255 AMTMYTKEGPAAFFKGFAPSFLRLGSWNVIMFVCFEQLKKELMK 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 33/101 (33%)
Mito_carr 109..205 CDD:395101 28/97 (29%)
Mito_carr 208..300 CDD:395101 31/93 (33%)
Ucp1NP_036814.1 Mito_carr 10..104 CDD:395101 33/93 (35%)
Solcar 1 11..102 33/90 (37%)
Mito_carr 110..205 CDD:395101 27/95 (28%)
Solcar 2 111..201 26/90 (29%)
Solcar 3 210..295 29/89 (33%)
Mito_carr 215..300 CDD:395101 30/89 (34%)

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