DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18418 and misc-1

DIOPT Version :10

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_493694.2 Gene:misc-1 / 173414 WormBaseID:WBGene00015186 Length:306 Species:Caenorhabditis elegans


Alignment Length:306 Identity:164/306 - (53%)
Similarity:215/306 - (70%) Gaps:13/306 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VPTHMKFVMGGTSGMLATCIVQPLDLLKTRMQISGTLGTREYKNSFEVLSKVLKNEGILSLYNGL 76
            ||..:||..|||:||.||.:||||||:|.|||:|||.|.:||::|...|:.::||||:.::||||
 Worm     7 VPNVVKFAFGGTAGMGATLVVQPLDLVKNRMQLSGTTGKKEYRSSMHALTSIMKNEGVFAVYNGL 71

  Fly    77 SAGLLRQATYTSAKMGVYQMELDWYRK-----NFGNYPSMVASMTMGIVAGAFGAMCGNPAEVAL 136
            |||||||||||:.::|.|...|:.:.:     :||      ....:|:.||..|:..|.|||:||
 Worm    72 SAGLLRQATYTTTRLGTYAFLLERFTEKDKPLSFG------MKAVLGMTAGGIGSFVGTPAEIAL 130

  Fly   137 IRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMKNQL 201
            |||..|.||..|.||||..|.:|..||.|:|||:.|||||.|||.||||||..|||:||..|..|
 Worm   131 IRMTGDGRLPVEQRRNYTGVVNALTRITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQAL 195

  Fly   202 --HGYLSEGIPLHLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKKVLKNEG 264
              .|.:.:||..|..|:::|||.|::.|||:|:||||||.||||||||||....||..||:||||
 Worm   196 LASGKVQDGIFCHFLASMISGLATTIASMPVDIAKTRIQSMKVIDGKPEYKNAFDVWGKVIKNEG 260

  Fly   265 AFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHMLSDSLSDSV 310
            .||:|||||||.||:||||:.:|:.|||||.||.:::|...::.::
 Worm   261 IFALWKGFTPYYMRLGPHTVLTFIILEQMNAAYFQYVLKRDVTSAL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 53/100 (53%)
Mito_carr 109..205 CDD:395101 51/97 (53%)
Mito_carr 208..300 CDD:395101 59/91 (65%)
misc-1NP_493694.2 Mito_carr 7..99 CDD:395101 51/91 (56%)
Mito_carr 101..196 CDD:395101 51/100 (51%)
Mito_carr 202..296 CDD:395101 59/93 (63%)

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