DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18418 and LOC1269885

DIOPT Version :10

Sequence 1:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_308539.3 Gene:LOC1269885 / 1269885 VectorBaseID:AGAMI1_005196 Length:302 Species:Anopheles gambiae


Alignment Length:293 Identity:93/293 - (31%)
Similarity:143/293 - (48%) Gaps:19/293 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MKFVMGGTSGMLATCIVQPLDLLKTRMQISG------TLGTREYKNSFEVLSKVLKNEGILSLYN 74
            |:|::||.|.|.|.....|||:||||.|:.|      .|..|.|:...:....|::.:|:..|..
Mosquito     1 MEFLLGGASSMCAVLFTNPLDVLKTRQQLEGELIAKQNLTKRSYRGIRQSFLTVVRTDGLRGLQK 65

  Fly    75 GLSAGLLRQATYTSAKMGVYQM--ELDWYRKNFGNYPSM--VASMTMGIVAGAFGAMCGNPAEVA 135
            ||.|.||.|.:..|.::|.||.  .|.|.:.  .|:||:  :.|:..|..||...|....|..|.
Mosquito    66 GLPAALLFQFSMNSVRLGTYQTVDNLGWTKS--ANHPSLTPLLSVFWGGCAGLVSATASCPFYVV 128

  Fly   136 LIRM--MSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMK 198
            .|::  ::........:.::.....|||.|.:..||..|:||...:|.|.:|.:..::||:|:.|
Mosquito   129 KIQLQAVTSGSYTARFQHHHSGTVSAFVNIYRQSGVRGLFRGYPASVARLVVGSAAEMASFSVCK 193

  Fly   199 NQLHGY--LSEGIPL-HLTAALVSGLLTSVTSMPLDMAKTRIQQMKV-IDGKP-EYSGTIDVLKK 258
            .....|  ..|.|.| .|.::.|:|..|||...|.|:..||:....| .:||. .|:...|...|
Mosquito   194 QFFLRYQVFQESIVLTALASSTVAGFFTSVLMSPCDVVTTRMTNQAVSANGKGLLYTNIFDCFLK 258

  Fly   259 VLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLE 291
            :.::||....:|||.|..:|:.|||:.:..|.|
Mosquito   259 IYRSEGIHGYYKGFVPMYLRVAPHTMLNLTFWE 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 34/99 (34%)
Mito_carr 109..205 CDD:395101 27/101 (27%)
Mito_carr 208..300 CDD:395101 30/87 (34%)
LOC1269885XP_308539.3 Mito_carr 3..91 CDD:395101 31/87 (36%)
Mito_carr 101..199 CDD:395101 25/97 (26%)
Mito_carr 211..296 CDD:395101 28/81 (35%)

Return to query results.
Submit another query.